Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20globosa_20[genbank_20GCA_5F001264815.1_202015-08-11] 138 sequences; 8,938,591 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq107 105 5e-18 seq86 102 6e-17 seq113 86.0 5e-12 >seq107 Length=33973 Score = 105 bits (116), Expect = 5e-18 Identities = 105/136 (77%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 48538 CGCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAG 48597 |||| || | ||| || | |||||| || || ||||||||||||||||||||||| || Sbjct 780 CGCCCCCGCGTAGACGTAGCACCAAGTGAAGGGTGCTCTCTTTTTGAATATTGTAGTCGC 839 Query 48598 ATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGG 48657 || | | || | || || | |||||||||||| || || || || |||||||||| | Sbjct 840 TTAAAGTGCGGCCATCTTCAAGCTGCTTACCGGCGAAGATAAGGCGTTGTTGATCCGGCG 899 Query 48658 GAACGCCCTCCTTGTC 48673 ||| ||| |||||||| Sbjct 900 GAATGCCTTCCTTGTC 915 >seq86 Length=214995 Score = 102 bits (112), Expect = 6e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 48551 CCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATC 48610 ||| | ||||| || || || ||| || || || ||||| ||| ||| | ||| | Sbjct 125761 CCGAAGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCACTCAGAGTGCGACC 125702 Query 48611 GTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTT 48670 ||| || | ||||||||| || || ||||| |||||||| |||| |||| ||||||||| Sbjct 125701 GTCTTCAAGCTGCTTACCAGCGAAGATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTT 125642 Query 48671 GTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAAT 48730 ||| |||||| || ||| | | | || || | ||| ||||| | ||| || Sbjct 125641 GTCTTGAATCTTGGCCTTCACATTGTCAATCGTGTCCGAGGACTCAACCTCGAGCGTGAT 125582 Query 48731 CGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||| || || ||||| || || || || || ||||| Sbjct 125581 CGTCTTGCCAGTCAAGGTCTTGACGAAGATTTGCAT 125546 >seq113 Length=631273 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 ||||| | || || | ||| | ||| || || || || || |||||||| ||| Sbjct 468926 CCGCCGCGCAGGCGAAGCACAAGATGCAGTGTCGATTCCTTCTGGATATTGTAGTCACTC 468867 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || | || | || ||||||||||||||||| || |||| |||||||| || | |||| Sbjct 468866 AGCGTACGTCCATCCTCCAACTGCTTACCGGCGAAAATCAAGCGCTGTTGGTCGGGGGGA 468807 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | ||| ||||| || || || ||||| | | | || || | ||| ||| Sbjct 468806 ATGCCTTCCTTATCTTGGATTTTGGCCTTTACGTTGTCGATCGTGTCGGATGACTCGACC 468747 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || | ||| || ||||| || |||| || || || ||||||||||| Sbjct 468746 TCAAGCGTGATTGTTTTGCCGGTCAGTGTCTTGACGAAAATCTGCAT 468700 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380936959310574