Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20globosa_20[genbank_20GCA_5F001264815.1_202015-08-11] 138 sequences; 8,938,591 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq85 134 9e-26 seq107 96.9 2e-14 seq86 86.0 4e-11 >seq85 Length=269369 Score = 134 bits (148), Expect = 9e-26 Identities = 388/592 (66%), Gaps = 9/592 (2%) Strand=Plus/Plus Query 474335 GGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTAGAA 474394 ||||||||||| || || || ||| |||||| ||||| ||||| || | || || Sbjct 122799 GGTATTGATTTGGGTACCACCTACTCTTGTGTGGCTGTGTGGCAGAACGACCGTGTCGAG 122858 Query 474395 ATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAAACT 474454 | |||||||||||||| ||||| | || ||||| || || ||| | || || || || Sbjct 122859 GTCATTGCCAATGACCAGGGTAACCGTACGACACCTTCGTACGTTGCCTTCACGGACACG 122918 Query 474455 GAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATACTATT 474514 || | |||||| || ||||| || || | || | || || || || ||| || Sbjct 122919 GAGCGTCTTATCGGCGATGCCGCCAAGAACCAGGTGGCTATGAACCCCCACAACACTGTT 122978 Query 474515 TTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGATATG 474574 || || || || | |||| ||||| || |||| || || ||||| || || ||| Sbjct 122979 TTCGACGCCAAGCGTCTGATCGGTCGCAAGTTTGCCGACACGGAGGTCCAGTCGGACATG 123038 Query 474575 CGTCATTGGCCTTTTAAGGT-GATAAATGTTGGTGGTAAACC--ATATATAGAAGCAATA 474631 || ||||| || || | | | ||| | || || || ||| || |||| Sbjct 123039 AAGCACTGGCCATTCGCTGTGGTTGACCGTTCG-GGCAAGCCTGCTATTAAGGTTGAATA 123097 Query 474632 CACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCAAA 474691 || | ||||| || || |||| || | || || || |||||| | || Sbjct 123098 CAAG--GGTGAGGAGAAGGTCTTCACACCCGAGGAGATCTCATCGATGGTTCTCCTGAAG 123155 Query 474692 ATGAAACAAACCGCGAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTACTGTT 474751 ||| | ||||| |||| ||||| || || | || || || | ||||| Sbjct 123156 ATGCGTGAGACCGCTGAAGCATACCTTGGTTCGGACGTGAAGGACGCTGTTGTGACTGTG 123215 Query 474752 CCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGT 474811 || || || || || || || || ||||| || ||||| || || || ||||| ||| Sbjct 123216 CCTGCCTACTTCAACGACTCACAGCGTCAGGCCACTAAGGACGCCGGTGTCATTGCTGGT 123275 Query 474812 CTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTGAT 474871 || |||||| | ||||| ||||| || ||||| || || || |||| || ||||| || Sbjct 123276 CTGAATGTTATGCGTATCATTAACGAGCCAACGGCTGCTGCCATTGCATACGGTCTCGAC 123335 Query 474872 AAGAATTCTGACAAAGAAGTAAATGTTTTAATCTTTGATT---GTGGAGGTA 474920 ||||| || | |||| ||||| | |||||||| | |||| |||| Sbjct 123336 AAGAAGGACGATAGAGAAAAGAATGTCCTCATCTTTGACTTGGGTGGTGGTA 123387 >seq107 Length=33973 Score = 96.9 bits (106), Expect = 2e-14 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 480552 CGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTT 480611 || ||||| || || | ||||| || || ||||| || ||| || || || ||| Sbjct 788 CGTAGACGTAGCACCAAGTGAAGGGTGCTCTCTTTTTGAATATTGTAGTCGCTTAAAGTG 847 Query 480612 CTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCT 480671 | | ||||||||| ||||| || || || ||||| ||||||||||| || ||||| ||| Sbjct 848 CGGCCATCTTCAAGCTGCTTACCGGCGAAGATAAGGCGTTGTTGATCCGGCGGAATGCCT 907 Query 480672 TCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGG 480731 |||||||| ||||| || ||||| || || ||||| | | ||| || Sbjct 908 TCCTTGTCCTGAATTTTGGCCTTGACGTTGTCGATGGTATCGCTACTTTCGACTTCGAGC 967 Query 480732 GTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || || || ||||| || || || ||||| || Sbjct 968 GTGATGGTCTTTCCAGTGAGGGTTTTCACAAAAATCTG 1005 >seq86 Length=214995 Score = 86.0 bits (94), Expect = 4e-11 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 480618 TCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTG 480677 |||||||| ||||| ||||| || || ||||| ||||| || |||||||| || |||||| Sbjct 125700 TCTTCAAGCTGCTTACCAGCGAAGATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTG 125641 Query 480678 TCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATA 480737 ||||||||||| || ||| ||||| || || | | | || || || || Sbjct 125640 TCTTGAATCTTGGCCTTCACATTGTCAATCGTGTCCGAGGACTCAACCTCGAGCGTGATC 125581 Query 480738 GTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || || | ||||| ||||| ||||| Sbjct 125580 GTCTTGCCAGTCAAGGTCTTGACGAAGATTTG 125549 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268173280510424