Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20globosa_20[genbank_20GCA_5F001264815.1_202015-08-11] 138 sequences; 8,938,591 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq86 131 3e-25 seq137 114 3e-20 seq113 89.7 1e-12 >seq86 Length=214995 Score = 131 bits (144), Expect = 3e-25 Identities = 158/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655 || || || | ||| || || || || ||||| || || || ||| ||| | | |||| Sbjct 125760 CGAAGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCACTCAGAGTGCGACCG 125701 Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 ||||| || || || ||||| ||||| || | ||||| || ||||| || || ||||| Sbjct 125700 TCTTCAAGCTGCTTACCAGCGAAGATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTG 125641 Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775 ||||||||||| || || ||||| |||||||| || | || || || | || ||| Sbjct 125640 TCTTGAATCTTGGCCTTCACATTGTCAATCGTGTCCGAGGACTCAACCTCGAGCGTGATC 125581 Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||||||| ||||| ||||| || || || ||||| Sbjct 125580 GTCTTGCCAGTCAAGGTCTTGACGAAGATTTGCAT 125546 >seq137 Length=390227 Score = 114 bits (126), Expect = 3e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642 ||| || | |||||| || || | ||||| || || || || || || || || ||| Sbjct 280105 ACCACCGCGCAAACGAAGCACGAGGTGCAACGTTGACTCCTTTTGAATGTTGTAGTCACT 280046 Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702 ||| | | || || || ||||| || ||||| ||||| || | ||||| || ||||| Sbjct 280045 CAGAGTACGGCCATCCTCGAGTTGCTTGCCAGCGAAGATCAGGCGCTGTTGGTCCGGAGG 279986 Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762 || || ||||| || ||||| || || || ||||| |||||||| || | ||| || Sbjct 279985 AATACCCTCCTTGTCCTGAATTTTCGCCTTGACATTCTCAATCGTGTCCGACGATTCCAC 279926 Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || | || ||||||||||| |||| ||||| || || | ||||| Sbjct 279925 CTCGAGGGTGATCGTCTTGCCCGTCAGGGTCTTGACGAACACTTGCAT 279878 >seq113 Length=631273 Score = 89.7 bits (98), Expect = 1e-12 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | || || || || | ||||| || ||||| ||||| ||||| || ||| Sbjct 468700 TACCACCACGCAGGCGAAGCACAAGATGCAGTGTCGATTCCTTCTGGATATTGTAGTCAC 468641 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 || | | || || || | || || || || || || | | ||||| || || | Sbjct 468640 TCAGCGTACGTCCATCCTCCAACTGCTTGCCGGCGAAAATCAAGCGCTGTTGGTCGGGGG 468581 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || |||||||||||||| || || || ||||| || || ||||| || | || | Sbjct 468580 GAATGCCTTCCTTATCTTGGATTTTGGCCTTTACGTTGTCGATCGTGTCGGATGACTCGA 468521 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | || | || || || ||||| ||||| ||||| || || || ||||| Sbjct 468520 CCTCAAGCGTGATTGTTTTGCCGGTCAATGTCTTGACGAAAATTTGCAT 468472 Score = 87.8 bits (96), Expect = 4e-12 Identities = 161/235 (69%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 82576 ATCACCTACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTAT 82635 ||||| ||| || | || || || || | ||||| || ||||| ||||| ||||| | Sbjct 468932 ATCAC--ACCGCCGCGCAGGCGAAGCACAAGATGCAGTGTCGATTCCTTCTGGATATTGT 468875 Query 82636 AATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGAT 82695 | ||| || | | || || || | || || || || || || | | ||||| | Sbjct 468874 AGTCACTCAGCGTACGTCCATCCTCCAACTGCTTACCGGCGAAAATCAAGCGCTGTTGGT 468815 Query 82696 CTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAG 82755 | || || || |||||||||||||| || || || ||||| || || ||||| || | Sbjct 468814 CGGGGGGAATGCCTTCCTTATCTTGGATTTTGGCCTTTACGTTGTCGATCGTGTCGGATG 468755 Query 82756 GTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || || || | || || || ||||| |||| ||||| || || |||||||| Sbjct 468754 ACTCGACCTCAAGCGTGATTGTTTTGCCGGTCAGTGTCTTGACGAAAATCTGCAT 468700 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981825464006782