Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20globosa_20[genbank_20GCA_5F001264815.1_202015-08-11] 138 sequences; 8,938,591 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq83 192 8e-43 >seq83 Length=277254 Score = 192 bits (212), Expect = 8e-43 Identities = 375/542 (69%), Gaps = 18/542 (3%) Strand=Plus/Plus Query 1455743 CGCTTTGTCCTGTTCCCCATCCGCTACCAGCGGATATGGGAAATGTACCAAAAAGGCCGA 1455802 ||||| ||||| ||||| ||||| ||||| || ||| |||||||| || ||||| || Sbjct 44900 CGCTTCGTCCTTTTCCCAATCCGTTACCATGAAATCTGGCAAATGTAC-AAGAAGGCAGA 44958 Query 1455803 GGCCTCCTTTTGGACCGCCGAGGAGGTCGACCTCGGCGCCGACACGGTCCACTGGGTG-- 1455860 || || |||||||| |||||||| | ||| | | ||| | | |||||| Sbjct 44959 AGCATCATTTTGGACGGCCGAGGAAATTGACTTGTCCAAGGACCTGTACGACTGGGACAA 45018 Query 1455861 TCGC-TGAGCGACGACGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCA 1455919 ||| ||| ||| |||||| || ||| | | || || || || || ||| || || Sbjct 45019 TCGGATGACGGACCCCGAGCGTCACTTCGTGAGCCATGTACTTGCGTTCTTT-GCAGCAT 45077 Query 1455920 GCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTCCAATTGCCA- 1455978 ||||| || || |||||| |||| || || || | || ||||| |||| Sbjct 45078 CAGATGGTATTGTCAACGAGAATCTGGTCGAGCGGTTCAGCGCCGAAGTCCAG--GCCAC 45135 Query 1455979 -GAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAACCTA 1456037 |||||||||| || || || ||||||||| || ||||||||||||||||||||||| Sbjct 45136 TGAGGCACGTTGCTTCTATGGCTTCCAGATCATGATGGAAAACATCCACTCTGAAACCTA 45195 Query 1456038 CTCGCTCCTGATCGACACCTACGTCAAGGACCCGGTCGAGAAGGACCACCTCTTTCGCGC 1456097 |||||| || || ||||| ||| | || || | ||| | || || Sbjct 45196 CTCGCTTCTTATTGACACGTACATTCGCGAGCCTGAACGCCGCGACTTTTTGTTCAATGC 45255 Query 1456098 CATCGACACGGTGCC-GTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGGATCAACA 1456156 || || || ||||| ||| |||| | | ||||| |||||||| | |||||| Sbjct 45256 TATTGAGACAGTGCCAGTC-GTGAAGCAGAAGGCTGACTGGGCTCTACGTTGGATCTCGG 45314 Query 1456157 AGGA--GGGCCTCGACACTTTGCCGAGCGGCTCGTCGGCTTTGCCGC-GTCGAGGGCATC 1456213 | | | |||||| || | ||||| || || | |||||| || |||||||||||| Sbjct 45315 ACCACCGTGCCTCG----TTCTCAGAGCGCCTTGTTGCCTTTGCTGCTGTCGAGGGCATC 45370 Query 1456214 TTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGT 1456273 |||||||||||| ||| ||||||| ||||||||||| || ||||||||||| ||| Sbjct 45371 TTTTTCTCGGGCTCATTCGCTTCCATCTTCTGGCTCAAGAAACGTGGCCTCATGCCTGGT 45430 Query 1456274 CT 1456275 || Sbjct 45431 CT 45432 Score = 134 bits (148), Expect = 2e-25 Identities = 190/265 (72%), Gaps = 4/265 (2%) Strand=Plus/Minus Query 259923 CGCCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGG 259982 |||| || || |||||||| |||||||| ||||| | ||||||||||| | || Sbjct 29068 CGCCGACTCTATTTAATGCTGGCACGCCTAATCCGCAAATGTCGTCGTGCTTCTTAGTGT 29009 Query 259983 ACATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCT 260042 ||||| | || || || |||||||| || ||||| |||||| ||| || | || Sbjct 29008 CTATGAAAGAAGACTCTATTGAGGGCATTTACGACACTCTCAAGACGTGTGCCATGATAA 28949 Query 260043 CCAAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCTACG 260102 |||| |||| || ||||||||| | | ||||| | || | | ||| | ||| Sbjct 28948 GCAAGACGGCTGGTGGCATCGGTCTAAACATCCACAATATCCGAGGTACAGGCTCGTACA 28889 Query 260103 TGGCGGGCACCAACGGCCAGTC--CAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGA 260160 | || ||||| || || ||| ||| || | |||||||||||||| ||||||||| | Sbjct 28888 TTGCTGGCACTAATGG--AGTAAGCAATGGAATCGTGCCCATGCTTCGAGTTTTTAACAA 28831 Query 260161 CACGGCGCGCTACGTCGACCAGTGC 260185 |||||| || |||||||||||| || Sbjct 28830 CACGGCTCGTTACGTCGACCAGGGC 28806 Score = 89.7 bits (98), Expect = 7e-12 Identities = 236/357 (66%), Gaps = 4/357 (1%) Strand=Plus/Minus Query 332867 CGCACAAAGCGCAGGATGGCACAACGGCTCTGCAGGGCCTCGATGACCATTGACGACGTG 332926 ||| ||||||||||||| ||||| || ||||| | | ||| |||| | | |||| Sbjct 185675 CGCCCAAAGCGCAGGATCGCACACCGACTCTGAATCGGCTCAATGATCTTATTCGACTGA 185616 Query 332927 TTGCAGGCCAGGGCAAACCGCGTCGTATTGGTATGCTTTTCCATGGTCGACCGGAGGGCC 332986 ||||| || | |||||||||||| | || | ||||| || ||| | ||| Sbjct 185615 TTGCATGCAAAACAAAACCGCGTCGTTGGCGCATAGATCTCCATCGTGCGCCGTAACGCC 185556 Query 332987 TGTTGGGCCGCCGGCGTGAGGCAGTCGGCCTCGTCGAGGATGATGATCTTGTGGCGCCCG 333046 || || || | || || | || || ||||| || || | ||||||||||| ||||| Sbjct 185555 TGCTGTGCACCAGGTGTCATGCTATCAGCCTCATCCAGCACAATGATCTTGTGCCGCCCC 185496 Query 333047 TGCGGCAGATCAACCCTTTTCGAGGCG-TGGTG-TTTGATGATCTTGCGCACGACGTCCA 333104 ||||||| | || ||||| ||| || |||||| | | ||||| || || | Sbjct 185495 GGCGGCAG--CGACACTTTTTTCTGCGCAAATGCTTTGATCTTACTTCGCACCACATCAA 185438 Query 333105 CGCCGCGCTCGTCCGACGCGTTGAGTTCGAGCACGGCCTCGTCGGCGGCCGCACCCAAGA 333164 ||||| || |||||||| || | || || || || || | | ||| | |||| | Sbjct 185437 TACCGCGATCATCCGACGCATTTAACTCCAGGACAGCTTCCTTGTAGGCGTCGCCCAGCA 185378 Query 333165 GGACGCGCGCCAGGCACGCGATGCTCGTGGTCTTGCCCGTGCCGGGCGGACCCGCCA 333221 || ||||||| || | ||||| || || || |||| || | |||| || Sbjct 185377 ATGCGTGCGCCAGACAATGAACACTCGTTGTTTTTCCTATGCCTGGGAGCCCCGACA 185321 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177797889646356