Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20globosa_20[genbank_20GCA_5F001264815.1_202015-08-11] 138 sequences; 8,938,591 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq83 183 4e-41 >seq83 Length=277254 Score = 183 bits (202), Expect = 4e-41 Identities = 1029/1621 (63%), Gaps = 40/1621 (2%) Strand=Plus/Plus Query 68956 TATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACCGTAA 69015 |||||||| || | || | |||||| || || || || ||| | ||| ||| Sbjct 27997 TATGTTTCGTACGTGCCATACTGTTCTGCGAGCTCGCATGAACGCTCGAGTGCGGCGTGG 28056 Query 69016 TAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAATGGATAA 69075 || || || |||||||||| | || ||| |||||||| | || || || |||||| Sbjct 28057 TAGATGGTCTCGAAAATCTGCAGGTTCAGACGGCGTGCTTCTTGGCTGTCAAACGGATAA 28116 Query 69076 TGTAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGTCTC 69135 | | || |||||||| |||| ||||| || ||||| || || || | || | | Sbjct 28117 CCCATGATCATGAATGCATCAGCCAGACCCTGTACACCAATTCCAATGGGACGGTGGCGC 28176 Query 69136 TTATTTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTAAGA 69195 ||||||| | || |||| || || || || ||||| || || ||| ||| Sbjct 28177 ATATTTGAGCGCCGGGCGCTAGGAACTGGGTAGTAGTTGATATCGATGATCCGATTGAGA 28236 Query 69196 TT-TCGGACTACTACTTTAACCACGTCCTTTA----------GTTTGAGAAAATCAAATC 69244 || | | || || |||||| | || || | | ||| | | || | | Sbjct 28237 TTCTTGCAC-ACGACTTTAGCAACATCGTGCAACCGCTGGAAGTTGTATATTTTCGAGGC 28295 Query 69245 GTCCAT--CTATAACAAACATATTCAGTGCTACAGATGCTAGATTACAAACTGCTACCTC 69302 | | | || || ||| | |||||| | ||| ||||| ||||| ||||| ||| Sbjct 28296 GCCAGTTCCTTCAATAAATGTGGGCAGTGCAATAGAGGCTAGGTTACACACTGCCGTCTC 28355 Query 69303 ATTAGA--ATTTGCATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCC 69360 | | | || |||| || || || ||||| || || | ||||| || || Sbjct 28356 CTCTGGCGAACTG--TATTCGATAATTTCGGTACAGAGGTTGGAGCTCTTGATCGTGCCG 28413 Query 69361 AGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCA 69420 || |||| ||||||||| || ||| || || ||||| | || |||||| | || Sbjct 28414 AGGTTTTTCTGATTACTTTTGCGGTTGGCCGCATCTTTGTATAACATGAACGGATTGCCC 28473 Query 69421 GTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTATT-ACGGTCTT 69479 || || || |||| || | ||| | | ||| | | || || | | || || Sbjct 28474 GTCTCTATTTGAGCCTCCAGAATGGCATACCACAGCTTCTGGGCCTTGACGGATCGTTTT 28533 Query 69480 GTAACGCTTCTCTTTTTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACATC 69539 | | || ||| ||||| || ||| ||| |||||| || || || | ||| Sbjct 28534 GCA-CGACCCTCACGCTCATAACGTTCATAAAGCTCTTCGAACTCCTCGCCGTAGCAATC 28592 Query 69540 ATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCG 69599 | | | || || |||| ||||||||| | ||||| | |||| | || || || Sbjct 28593 AGCAAGACCTGGTGCTTCAGCTGGACACATAAGAGACCAATCTTCATTCTTCTCGACACG 28652 Query 69600 TTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTC 69659 ||||| || || || || | ||| | || | || | ||| | | | | || || Sbjct 28653 CTTCATGAAAAGGTCTGGCACCCACATGGCCAGGAACAAATCGCGTGCGCGAACCTCGTC 28712 Query 69660 ATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAG 69719 ||||| ||||| |||||| | || || | | ||||| |||||||| || || Sbjct 28713 CTTTCCATGGTTTTTACGAAGATCCACGAATTCAAATACATCAGGGTGCCATGGCTCCAG 28772 Query 69720 ATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTT 69779 || || || | | || ||||| ||||| || ||||| || | ||| | || ||||| Sbjct 28773 GTAAATGGCAAACGCACCTGGTCGCTTATTGCCGCCCTGGTCGACGTAACGAGCCGTGTT 28832 Query 69780 ATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATA 69839 ||| | |||| ||||| || | || ||||| | ||||| || |||| ||| || Sbjct 28833 GTTAAAAACTCGAAGCATGGGCACGATTCCATTGCTTACTCCATTAGTGCCAGCAATGTA 28892 Query 69840 ACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGAT 69899 ||| | | || ||||| || |||||| || || || ||| | || || Sbjct 28893 CGAGCCTGTACCTCGGATATTGTGGATGTTTAGACCGATGCCACCAGCCGTCTTGCTTAT 28952 Query 69900 TAGAGCACAACGT-TTCAATGTGTCATATATACCCTCTATGCTATCATCTATCAT-GTTA 69957 | ||||| ||| || | ||||| || || ||||| || || ||| |||| | | Sbjct 28953 CATGGCACA-CGTCTTGAGAGTGTCGTAAATGCCCTCAATAGAGTCTTCTTTCATAGACA 29011 Query 69958 AGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGAT 70017 ||||| || |||||||| ||| || || |||||||||| || || ||| Sbjct 29012 CTAAGAAG-CACGACGACATTTGCGGATTAGGCGTGCCAGCATTAAATAGAGTCGGCGAT 29070 Query 70018 GCGTGAGTGAACCATTTTTCAGAAA-GCAGATTGTATGTTTCAATAGCTGATTCTATATC 70076 || || ||||| |||||||| | | || |||||||| ||||| || ||| || || Sbjct 29071 GCATGTGTGAATGCCTTTTCAGACATGTAG-TTGTATGTCTCAATGGCACTTTCAATGTC 29129 Query 70077 C-CACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTT 70135 ||| | |||||||| | ||||||||||| | ||| |||||||| ||||| | || Sbjct 29130 TTCACCG-TGAATTCCAACAGCGACACGCATGAGCATGTGCTGAGGCCGTTCGGCAACTT 29188 Query 70136 TATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTA-T 70194 || ||| || ||| ||||| || ||| |||||||| || ||||| ||||||| | Sbjct 29189 TACCATTAATGCGCAAGAGGTAAGAGCGTTCTAGAGTTTTGAAGCCAAAGAAGTTGTAGT 29248 Query 70195 GAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTATCCTTATATTTGGTAACTATA 70254 | ||| || | || || || ||| | || | || || || ||| | || || Sbjct 29249 GGAAA-TCACGCTCATAGATGATAGCGGAGTCCAGAAGTTCGCGATGTTTCATCACAGTA 29307 Query 70255 TCCATAACAGTAGGT---GAGATAATCGGAG-ATCGTTTACCATTTTTAGGATTAACATA 70310 | | | ||| | || || || |||| | | ||| |||| ||||| ||||| Sbjct 29308 T---TGAAAGTCTCTTCAGATATCAT-GGAGCTTGGGCGGCCAGTTTTTGGATTCACATA 29363 Query 70311 GTTGAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAAATTTGA 70370 || ||||||| || || | ||||| || || || |||||||| | ||| Sbjct 29364 GTCATGCAAATCTTGAATGACCTGGCTAAAACTCTTCTTGGTCTCCTTGTGAAGATTGCT 29423 Query 70371 TATGGCTATTCTGGCTGCTAGAATAGCATAGTCAGGATGTTGTGTAGTACAAGTA-GCTG 70429 ||||| || | ||||| || | |||||||| || ||| || || | ||| || | Sbjct 29424 AATGGCAATCCGCGCTGCCAGTACGGCATAGTCTGGGTGTGTCGTGGT-CTTGTACGCGG 29482 Query 70430 CTATTTCCGCAGCTAACGTATCTAATTCTATAGTTGTAACTCCGTTATATAGCCCTTGAA 70489 | |||| || || || |||| | || | || || || || | || | || | | Sbjct 29483 CCGTTTCGGCTGCCAAATTATCAAGCTCAACGGTCGTGACCCCCTCGTAGATACCATCGA 29542 Query 70490 TAACTTTCATGGCTATTTTGATAGGATCTATGAATTCTGTGTTCAGACCATAACATAATT 70549 ||||||| | | |||| ||| ||||| | || | ||| || ||||| || | || Sbjct 29543 TAACTTTTCTCGTAATTTCGATGGGATCAACAAAGTTCATGTCCAAGCCATAGCACAGTT 29602 Query 70550 T 70550 | Sbjct 29603 T 29603 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686907615082320