Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20globosa_20[genbank_20GCA_5F001264815.1_202015-08-11] 138 sequences; 8,938,591 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq83 199 4e-46 seq81 118 1e-21 >seq83 Length=277254 Score = 199 bits (220), Expect = 4e-46 Identities = 515/777 (66%), Gaps = 6/777 (1%) Strand=Plus/Minus Query 53179 GCCTCAGTATCTTTTCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGT 53238 ||||||| | | ||||||| ||||| | || || |||||||| ||| ||| Sbjct 29175 GCCTCAGCACATGCTCATGCGTGTCGCTGTTGGAATTCACGGTGAAGACATTGAAAGTGC 29116 Query 53239 CCGTGAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTT 53298 | |||||| ||| ||| ||| ||||| || || || || |||| || || || Sbjct 29115 CATTGAGACATACAACTACATGTCTGAAAAGGCATTCACACATGCATCGCCGACTCTATT 29056 Query 53299 CAACGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGA 53358 || ||||| ||| | | || || |||||| |||||| | ||| | ||||| || || Sbjct 29055 TAATGCTGGCACGCCTAATCCGCAAATGTCGTCGTGCTTCTTAGTGTCTATGAAAGAAGA 28996 Query 53359 CTCGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGG 53418 ||| || || ||||| ||||| || |||||| ||||||| || |||| | | || Sbjct 28995 CTCTATTGAGGGCATTTACGACACTCTCAAGACGTGTGCCATGATAAGCAAGACGGCTGG 28936 Query 53419 TGGTATCGGTATCCACTGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAA 53478 ||| |||||| | || | || |||| | | ||| | || || || || Sbjct 28935 TGGCATCGGTCTAAACATCCACAATATCCGAGGTACAGGCTCGTACATTGCTGGCACTAA 28876 Query 53479 CGGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGT 53538 || || | ||||||||||||| ||||| || || || ||||||||||| || ||||| Sbjct 28875 TGGAGTAAGCAATGGAATCGTGCCCATGCTTCGAGTTTTTAACAACACGGCTCGTTACGT 28816 Query 53539 CAACCAGGGTGGTGGGAAGCG-CAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACG 53597 | ||||||| || ||||| | ||| | |||| ||||| ||||| ||||| |||||| Sbjct 28815 CGACCAGGGCGGCAATAAGCGACCAGGTG-CGTTTGCCATTTACCTGGAGCCATGGCACC 28757 Query 53598 CCGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCC 53657 | || | | || || | || || ||| || || || | || ||| | ||| | Sbjct 28756 CTGATGTATTTGAATTCGTGGATCTTCGTAAAAACCATGGAAAGGACGAGGTTCGCGCAC 28697 Query 53658 GTGACCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACG 53717 | || |||| || ||||| | || ||||| |||||| | || |||||| | | Sbjct 28696 GCGATTTGTTCCTGGCCATGTGGGTGCCAGACCTTTTCATGAAGCGTGTCGAGAAGAATG 28637 Query 53718 AGGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGG 53777 | || |||| || ||||| || || || || || | | |||||| |||| Sbjct 28636 AAGATTGGTCTCTTATGTGTCCAGCTGAAGCACCAGGTCTTGCTGATTGCTACGGCGAGG 28577 Query 53778 AGTTTAACGAGATGTATCGGACG-TACGCAGTTCAGGGCCGCTACAAGAAGA-AGGTCAA 53835 |||| | ||| | ||| | ||| || | | |||| || | ||| | || ||||| Sbjct 28576 AGTTCGAAGAGCTTTAT-GAACGTTATGAGCGTGAGGGTCG-TGCAAAACGATCCGTCAA 28519 Query 53836 GGCGCGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACAT 53895 ||| | || | ||| |||| || || || || | |||||||| | |||| ||| Sbjct 28518 GGCCCAGAAGCTGTGGTATGCCATTCTGGAGGCTCAAATAGAGACGGGCAATCCGTTCAT 28459 Query 53896 GTGCTACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGGCGTCATCAA 53952 || ||||| ||| ||| |||| || || || ||||| ||| ||||| ||||| Sbjct 28458 GTTATACAAAGATGCGGCCAACCGCAAAAGTAATCAGAAAAACCTCGGCACGATCAA 28402 >seq81 Length=1232180 Score = 118 bits (130), Expect = 1e-21 Identities = 227/332 (68%), Gaps = 6/332 (2%) Strand=Plus/Plus Query 118013 AGCCCCTTGATATGGGAACCGTCCAGATCCGCATCGGTCATGATCATCAGGCGGCCGTAC 118072 || || ||||| ||||||||||| | ||| ||| ||||||||||| || | ||||||| Sbjct 592291 AGACCTTTGATGTGGGAACCGTCAAAGTCCTGATCTGTCATGATCATGAGACTGCCGTAC 592350 Query 118073 CGTAAATC-TCTCAGG--GAGTTATAAACCTTACCATGTTGGAGCCCGAGGATCTTTTTA 118129 || || | || || ||| || ||| ||||| || || |||||||||| || Sbjct 592351 CGCAAGCCATCGACGGTCGAG---TACGTCTTGCCATGCTGTAGACCGAGGATCTCCTTG 592407 Query 118130 AGGTTGGAAAATTCCTCATTTTCCGTCACCTGTTTTATGGTGGCGTCCCGAACGTTGCGC 118189 | ||| || || ||||| | | | || | || || || || || || || Sbjct 592408 ATGTTCTTAATCTCGGTATTTTTCTTGATTTGATCGTACGTAGCCTCACGCACATTCAGC 592467 Query 118190 GGCTTACCCCGCAGTGGAAACACGCCAAACTTGTCACGGCCCACAACGCTCAAGCCGGCA 118249 ||||||| |||| |||||||| ||| || |||||||| || |||| | || | Sbjct 592468 AGCTTACCTCGCAAGGGAAACACACCATACGCATCACGGCCAACCTCGCTTAGTCCCGAC 592527 Query 118250 ATAGCAAGGGCCTTCGCCGAGTCACCCTCGGTAATAATAAGAGTGCACTCGGTGCTGCGA 118309 | |||||| | || || |||||||| ||||| | || || ||||| || | || || Sbjct 592528 ACAGCAAGACCTTTGGCTGAGTCACCTTCGGTGAGGATGAGTGTGCATTCTGCACTCCGT 592587 Query 118310 TGAGTACCGGCCCAATTAGCATCATCCAGCTT 118341 | || || ||||| || ||||| || ||||| Sbjct 592588 TTCGTGCCAGCCCAGTTCGCATCTTCGAGCTT 592619 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215056052400