Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20globosa_20[genbank_20GCA_5F001264815.1_202015-08-11] 138 sequences; 8,938,591 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq107 150 4e-31 seq137 141 2e-28 seq86 120 7e-22 seq113 114 3e-20 seq83 93.3 1e-13 >seq107 Length=33973 Score = 150 bits (166), Expect = 4e-31 Identities = 146/188 (78%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||| |||||||| ||||| ||||| || ||||| ||||| || ||||| || Sbjct 1005 CAGATTTTTGTGAAAACCCTCACTGGAAAGACCATCACGCTCGAAGTCGAAAGTAGCGAT 946 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| || ||||||||||| ||||| || || ||||| || ||| Sbjct 945 ACCATCGACAACGTCAAGGCCAAAATTCAGGACAAGGAAGGCATTCCGCCGGATCAACAA 886 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || |||||||||||||| || ||||| |||||||| | ||| | ||| || || | Sbjct 885 CGCCTTATCTTCGCCGGTAAGCAGCTTGAAGATGGCCGCACTTTAAGCGACTACAATATT 826 Query 178104 CAAAAAGA 178111 |||||||| Sbjct 825 CAAAAAGA 818 >seq137 Length=390227 Score = 141 bits (156), Expect = 2e-28 Identities = 155/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||| | ||||| || || || || || || ||||||||||||||||||||| || ||| Sbjct 279881 CAAGTGTTCGTCAAGACCCTGACGGGCAAGACGATCACCCTCGAGGTGGAATCGTCGGAC 279940 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || ||||| ||||| || ||||||||||| || || || ||||||||||| || Sbjct 279941 ACGATTGAGAATGTCAAGGCGAAAATTCAGGACAAGGAGGGTATTCCTCCGGACCAACAG 280000 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||| || || || ||||| ||||| | ||||| || || ||| | Sbjct 280001 CGCCTGATCTTCGCTGGCAAGCAACTCGAGGATGGCCGTACTCTGAGTGACTACAACATT 280060 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 ||||| || ||||| |||| || || Sbjct 280061 CAAAAGGAGTCAACGTTGCACCTCGT 280086 >seq86 Length=214995 Score = 120 bits (132), Expect = 7e-22 Identities = 150/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || || | || || || |||||||| |||||||| || ||| ||| Sbjct 125549 CAAATCTTCGTCAAGACCTTGACTGGCAAGACGATCACGCTCGAGGTTGAGTCCTCGGAC 125608 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || || |||||||| ||||| || || || ||||||||||| || Sbjct 125609 ACGATTGACAATGTGAAGGCCAAGATTCAAGACAAGGAGGGCATTCCTCCGGACCAACAG 125668 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||| || || ||||| ||||| || | ||||| || || ||| || Sbjct 125669 CGTCTGATCTTCGCTGGTAAGCAGCTTGAAGACGGTCGCACTCTGAGTGACTACAACATC 125728 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || || || Sbjct 125729 CAGAAGGAGTCGACCCTTCACCTGGT 125754 >seq113 Length=631273 Score = 114 bits (126), Expect = 3e-20 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| || || | || || ||||| ||||| || ||||| || || ||| Sbjct 468475 CAAATTTTCGTCAAGACATTGACCGGCAAAACAATCACGCTTGAGGTCGAGTCATCCGAC 468534 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| ||||| || || || || || || ||||| || || || ||||| || Sbjct 468535 ACGATCGACAACGTAAAGGCCAAAATCCAAGATAAGGAAGGCATTCCCCCCGACCAACAG 468594 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | || |||||||| || ||| | || |||||| | || || || || || || Sbjct 468595 CGCTTGATTTTCGCCGGCAAGCAGTTGGAGGATGGACGTACGCTGAGTGACTACAATATC 468654 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || ||||| |||||||||||||| Sbjct 468655 CAGAAGGAATCGACACTGCATCTTGT 468680 Score = 114 bits (126), Expect = 3e-20 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || || || || || ||||| ||||| || ||||| || || ||| Sbjct 468703 CAGATTTTCGTCAAGACACTGACCGGCAAAACAATCACGCTTGAGGTCGAGTCATCCGAC 468762 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| ||||| || || || || || || ||||| || || || ||||| || Sbjct 468763 ACGATCGACAACGTAAAGGCCAAAATCCAAGATAAGGAAGGCATTCCCCCCGACCAACAG 468822 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | || |||||||| || ||| | || |||||| | || || || || || || Sbjct 468823 CGCTTGATTTTCGCCGGTAAGCAGTTGGAGGATGGACGTACGCTGAGTGACTACAATATC 468882 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || ||||| |||||||||||||| Sbjct 468883 CAGAAGGAATCGACACTGCATCTTGT 468908 >seq83 Length=277254 Score = 93.3 bits (102), Expect = 1e-13 Identities = 174/253 (69%), Gaps = 2/253 (1%) Strand=Plus/Plus Query 214128 GTTTTTCTGGTTGCTTTTGCGGCAAATGGCATCTTTGTATGCGATGAAAGGCATTCCCAC 214187 ||||||||| || ||||||||| |||||||||||| ||||| || | ||| Sbjct 28416 GTTTTTCTGATTACTTTTGCGGTTGGCCGCATCTTTGTATAACATGAACGGATTGCCCGT 28475 Query 214188 CTCGACTTGAGCGACAAGAATGTGATGCCAGAGTTCTTGGGCCTTCAC-GACCTTTTTGG 214246 ||| | |||||| | |||||| || ||| || | |||||||| || || | |||| | Sbjct 28476 CTCTATTTGAGCCTCCAGAATGGCATACCACAGCTTCTGGGCCTTGACGGATCGTTTT-G 28534 Query 214247 CTCTTCCCTCGTTTTCGTACTTTTCATAAAGAGACTCAAATTCCGAACCGTAGACATCAT 214306 | | ||||| || || ||||||||| || || ||| |||||| |||| Sbjct 28535 CACGACCCTCACGCTCATAACGTTCATAAAGCTCTTCGAACTCCTCGCCGTAGCAATCAG 28594 Query 214307 CAAGACCGGGAGCCTCGTTGGGGCAGAAAAGACTCCATTGTCCATTATCCCTGACTCTTT 214366 ||||||| || || || || || | |||| ||| | | |||| | | ||| | | Sbjct 28595 CAAGACCTGGTGCTTCAGCTGGACACATAAGAGACCAATCTTCATTCTTCTCGACACGCT 28654 Query 214367 TCATGAAAAGGTC 214379 ||||||||||||| Sbjct 28655 TCATGAAAAGGTC 28667 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203729071652772