Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20japonica_20[genbank_20GCA_5F001264785.1_202015-08-11] 295 sequences; 8,341,760 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq262 98.7 2e-15 seq216 91.5 3e-13 >seq262 Length=46027 Score = 98.7 bits (108), Expect = 2e-15 Identities = 119/161 (74%), Gaps = 1/161 (1%) Strand=Plus/Minus Query 230440 TGTCGCCTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGAC 230499 |||||| | |||||||||||||| || ||| | |||||||| || || || || ||| Sbjct 4814 TGTCGC-TCATTGGCATGAACGCCCGTCTGATGTGCCAGTACATTGAGTTTGTTGCGGAC 4756 Query 230500 CGCATTTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTT 230559 ||| | |||| || || || || ||| |||||||| | ||||||||| | ||| Sbjct 4755 CGCCTGCTTGTCGCGCTCGGCAACTCGAAGCACTACAACTCGACGAACCCCTTCGACTTT 4696 Query 230560 ATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGA 230600 |||||| ||| ||||| || || ||| | ||||| ||||| Sbjct 4695 ATGGAGAACATCTCGCTCCAGGGCAAGTCGAACTTTTTCGA 4655 >seq216 Length=89711 Score = 91.5 bits (100), Expect = 3e-13 Identities = 371/579 (64%), Gaps = 23/579 (4%) Strand=Plus/Plus Query 319459 TGGATAATAGAGGTGCAAACAGCGTCGAGGAACCCGGAGTCGTGTGACACAATCACGCAC 319518 |||| ||| ||| || || ||| |||||| ||||||||| |||||||| | | Sbjct 29315 TGGAGAATGTCGGTACACACGTCGTTCAGGAACTTGGAGTCGTGCGACACAATGATCGAG 29374 Query 319519 GAAACGTCCTTAAGGTTGATCAGGTATTCAATCAACCACCTCACGTTAGACACAGAAAGA 319578 | || | ||| || ||||||| || | | |||| ||||||| || | Sbjct 29375 GTGGTCTCGGTCAGGCTGGTCAGGTAGTCGGTGATCCACTTCACGTTGATGACGTCCAAG 29434 Query 319579 TGGTTGGTCGGCTCGTCAAGAAGCAGTAGCTTTGCGTTCAGGAGCATTGCACGTGCAAGA 319638 ||||| |||||||| || || ||||| | | || || | |||| ||||| ||||| Sbjct 29435 TGGTTCGTCGGCTCATCGAGCAGCAGAATGTCGGCCTTGAACAGCACGGCACGCGCAAGG 29494 Query 319639 GCGAGTTTCATTTTCCACCCTCCGGAAAGAGTGTTAATTGGGGCAGATTGGCG---CTCA 319695 ||||| ||||| ||||| || || || || | | || ||| | | ||||| ||| Sbjct 29495 GCGAGCTTCATCTTCCAACCACCCGACAGGGCAGTGATGGGGCCGGCCTGGCGGGTCTCG 29554 Query 319696 ATATCAAAGCCAACCGATTCTAGAGTAGTTAC-GATCTTTTCACGAGACCAAATGTTTTC 319754 || ||||| | | | || ||| || | || | | || | ||| | Sbjct 29555 ---TCGAAGCCCATC--TCCTTGAGG-GTGGCAGAAGCCTCCTCGTG-------GTTGAC 29601 Query 319755 CTTTACTTGTTCATCATTGGCAATGAAGTCAATGATAGCCGTGTTAGAATCGGACCCGTC 319814 || | | | || | |||||||||| | || | ||| | || || ||||| Sbjct 29602 GTTCAGGCGCTTGTCGGCGACAATGAAGTCGAGAATCGAGATGTCACCCTCCGAGCCGTC 29661 Query 319815 GAGATCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCCTTCAAGCTG 319874 ||| ||||| || ||||| || | | || | |||||| || || | ||| Sbjct 29662 GAGGTCGTGCTCGACGTACCAGGTGCGGACCTCGTCGGGGCTGGGGAAGCCCTCGACCTG 29721 Query 319875 GCCGTTCACAATAGCGCGCATCAGGGTTGATTTACCCGCCCCGTTTGGCCCACACAGACC 319934 ||||||| || |||||||| ||||| || ||||||| ||||| | ||||| ||||| Sbjct 29722 GCCGTTCTGGATGGCGCGCATGAGGGTCGACTTACCCGAACCGTTACGACCACAGAGACC 29781 Query 319935 GTAGCGGTTTCCGCGTTTCAGGTTGAACCGCGTG---TTGTTCAGAAGAATTTTTCCACC 319991 |||||||| || || || || || | ||| ||||||| ||||| || |||| Sbjct 29782 GTAGCGGTGACCACGCTTAAGACGGA---GAGTGGCCGTGTTCAGCAGAATCTTGGCACC 29838 Query 319992 ATATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 320030 || || || || || | ||| | || || || |||| Sbjct 29839 GTAGGCGAGCGAGAACTGACAGTTGCAGAGGTCGACACC 29877 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057820001755850