Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20japonica_20[genbank_20GCA_5F001264785.1_202015-08-11] 295 sequences; 8,341,760 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq246 150 4e-31 seq80 150 4e-31 seq276 100 6e-16 >seq246 Length=57307 Score = 150 bits (166), Expect = 4e-31 Identities = 408/622 (66%), Gaps = 13/622 (2%) Strand=Plus/Minus Query 248824 TTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAGATCGTG 248883 ||||| | |||||| ||||||||| ||||| || || || | |||||| | | | Sbjct 37066 TTCTTCGGTTTCAAGACGCTGGAGCGTTCGTACCTGCTGCGCATCAACGGCAAGGTGGCG 37007 Query 248884 GAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGACATAGAG 248943 || || ||||||||| | ||||| || |||||||| || ||| ||| | | | Sbjct 37006 GAGCGCCCCCAGCACATGCTCATGCGTGTTGCTGTCGGTATCCACGGCACCGACGTTGCG 36947 Query 248944 AGCGTGCTCGAGACGTACACCGGAATGA--GTGAACGCTGGATGACACATGCCACACCGA 249001 |||| | ||||||| |||| | ||| | ||| || | || || ||| | |||| Sbjct 36946 AGCGCGATCGAGACCTACAACATGATGTCGGAGAAGGCCT--TTACGCACGCCTCGCCGA 36889 Query 249002 CGCTCTTCAACGCCGGTACCGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGCCATGC 249061 | ||||||||||||||||| ||| ||| || |||||||| || | |||| Sbjct 36888 CTCTCTTCAACGCCGGTACACCGAACCCCCAGATGTCGTCGTGCTTCCTGGTGTGCATGA 36829 Query 249062 AAGACGACTCTGTCGACGGCATTTATGACACGCTTAAACAGACGGCGAAGATTTCTAAAT 249121 | |||||||| | || |||||||| |||||||| || | |||| |||| || Sbjct 36828 AGGACGACTCGATTGAGGGCATTTACGACACGCTCAAGTCGTGCGCGATGATTAGCAAGA 36769 Query 249122 TCGCGGGCGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTCGTACATCAAAG 249181 || || || ||||||||| | || | |||||| | | ||||||||||| | Sbjct 36768 CGGCCGGTGGTATCGGTCTCAACATCCACTGCATCCGTGGTACCGGTTCGTACATTGCCG 36709 Query 249182 GTACAAATGGGGTCAGTGATGGTATCGTACCCCTCCTTCGATGCTTTGAGTCCACCGCCA 249241 | || || || || || | |||||| | ||| | || || | | ||| ||| Sbjct 36708 GCACGAACGGTGTTAGCAACGGTATCATTCCCATGCTCCGTGTGTACAACAACACGGCCC 36649 Query 249242 GGTTCATCAACCAGGCCGG------GCGCCGAAAGGGGTCGTTCGCCATGTATTTGGAAG 249295 | | || |||||| || ||||| || |||| ||||| || | || Sbjct 36648 GCTATGTCGACCAGGGTGGCAACAAGCGCC---CTGGTGCGTTTGCCATTTACCTTGAGC 36592 Query 249296 TGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAACGAGCTCA 249355 ||||||| | || | || |||||| | ||| | |||||| |||| || ||| Sbjct 36591 CGTGGCACTCGGACGTCTTTGAGTTCATTGACCTCCGCAAGAACCACGGTAAGGAGGAGG 36532 Query 249356 TGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATGCGCCGCGTCA 249415 | | ||||| ||||| ||||||| ||| |||||| | || |||||||| || ||| Sbjct 36531 TTCGTGCGCGCGACCTTTTCTACGCCCTATGGGTCCCTGATCTGTTCATGAAGCGTGTCG 36472 Query 249416 AGGCCGACGGCGATTGGACGCT 249437 || | || || |||||||| Sbjct 36471 AGCAGGGTGGTGACTGGACGCT 36450 >seq80 Length=15381 Score = 150 bits (166), Expect = 4e-31 Identities = 246/360 (68%), Gaps = 32/360 (9%) Strand=Plus/Minus Query 254001 CTTCCTCATTTGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCG 254060 || || ||| |||| || |||| || ||||| || ||||||||||| || ||||||||| Sbjct 8581 CTCCCCCATATGCTCTTTTACGGCCCCCCCGGCACCGGCAAGACGTCGACGATCCTGGCG 8522 Query 254061 CTGGCCCGAACCCTGTTGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGCT 254120 || || || |||| ||| | | |||| ||| ||||||||||||||||| Sbjct 8521 CTTGCGCGGCAGCTGTACGGCCCCGAGCTGATGAAGTCGCGTGTGCTCGAGCTGAACGCG 8462 Query 254121 TCTGACGAACGCGGGTTGGACGTCGTCCGCGACAAGATCAAGACTTTCTCCAAGATGTCG 254180 || ||||| ||||| | | ||||||||| || ||||||||| | || |||||||| | Sbjct 8461 TCCGACGAGCGCGGCATTGCCGTCGTCCGTGAAAAGATCAAGTCGTTTGCCAAGATGGCC 8402 Query 254181 ATTTCGTCGTTCCAACCCG------GCTGT-------------------------CCGCC 254209 | ||| || |||||||| ||| | ||||| Sbjct 8401 GTGTCGGCG-CCCAACCCGTACGTTGCTCTTTTCTCACTCAGGAATTACCCCTCGCCGCC 8343 Query 254210 TTTCAAGCTCGTGATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCAGTCCGCCCT 254269 | |||| || | ||||||||||||||||||| ||||||| ||||| ||| ||| || Sbjct 8342 GTACAAGGTCATTATCCTGGACGAGGCGGACAGCATGACGCAGGACGCCCAGGGCGCGCT 8283 Query 254270 CCGCCGAACGATGGAGACGCACTCCGTTGTGACGCGTTTTTGCCTGGTGTGCAACTACGT 254329 ||||| | |||||| | || | |||||| || ||||||||||||||||| || Sbjct 8282 GCGCCGCATTATGGAGCAGTACAGCCGCACGACGCGCTTCTGCCTGGTGTGCAACTATGT 8223 >seq276 Length=39448 Score = 100 bits (110), Expect = 6e-16 Identities = 188/271 (69%), Gaps = 18/271 (7%) Strand=Plus/Minus Query 254011 TGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCGCTGGCCCGAA 254070 |||| ||| | || || ||||| || || |||||||| || ||| |||||||||| | Sbjct 7983 TGCTCTTCTATGGCCCCCCCGGTACGGGTAAGACGTCGACGATCATGGCGCTGGCGCAGC 7924 Query 254071 CCCTGTTGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGCTTCTGACGAAC 254130 ||||| ||| || || || | | ||||||||||||||||| || ||||| | Sbjct 7923 GCCTGTATGGCAAGAATTTCAAGA---ACCATGTGCTCGAGCTGAACGCGTCGGACGACC 7867 Query 254131 GCGGGTTGGACGTCGTCCGCGACAAGATCAAGACTTTCTCCAAGATGTCGATTTCGTCGT 254190 |||| | ||||| || |||| | |||||||| | ||| |||| || ||| || Sbjct 7866 GCGGAATCGACGTGGTGCGCGGCCAGATCAAGTCGTTC-GCAAGCACGCG-CAACGT-GT 7810 Query 254191 TC------CAACCCGGCTGTCCGCCTTTCAAGCTCGTGATCCTGGACGAGGCGGACACCA 254244 || |||| | | || |||||||| | || ||||||||||||| ||| Sbjct 7809 TCAGCACGCAACAAG---ATACG---TTCAAGCTTATTGTCTTGGACGAGGCGGATGCCA 7756 Query 254245 TGACGGCCGACGCGCAGTCCGCCCTCCGCCG 254275 ||||| | ||||||| |||| |||||||| Sbjct 7755 TGACGCAGGCCGCGCAGGCCGCGCTCCGCCG 7725 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073762341498560