Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20japonica_20[genbank_20GCA_5F001264785.1_202015-08-11] 295 sequences; 8,341,760 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq21 149 5e-31 seq57 125 6e-24 seq294 122 7e-23 seq218 118 8e-22 >seq21 Length=392 Score = 149 bits (164), Expect = 5e-31 Identities = 156/205 (76%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| ||||||||||||||||||||||||||||| || || |||| ||||| || Sbjct 92 GTGGAGCGTGCTCTCCTTCTGAATGTTGTAGTCCGAGAGGGTACGGCCGTCCTCCAGCTG 151 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || |||||||| ||||||||||||||||| ||||| | |||||||||||| || || Sbjct 152 CTTGCCGGCGAAGATCAACCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGAACCTT 211 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | |||| | | ||| ||||||| || ||||||||||| || Sbjct 212 CGACTTCACAATGTCGATCGTGTCGCTAGACTCGACCTCCAGAGTGATCGTCTTGCCAGT 271 Query 45313 CAGAGTCTTCACAAAGATTTGCATG 45337 |||||||| | ||||||||||||| Sbjct 272 GAGAGTCTTGATAAAGATTTGCATG 296 >seq57 Length=21272 Score = 125 bits (138), Expect = 6e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| ||||||||| ||||||||| |||||||||||| |||| ||| | || || Sbjct 311 ACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGGCCATCCTCG 370 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || ||||| || |||| ||||||||||| ||||| | |||||||||||| Sbjct 371 AGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGG 430 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | ||||| | ||| ||||| | ||| || ||||| Sbjct 431 ATCTTGGCCTTGACGTTCTCAATCGTGTCCGAAGACTCGACCTCGAGGGTGATTGTCTTT 490 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || || ||||| ||||||| |||||| Sbjct 491 CCGGTAAGGGTCTTAACAAAGACTTGCAT 519 >seq294 Length=28318 Score = 122 bits (134), Expect = 7e-23 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| ||| || || ||||||||| ||||||||||| || ||| |||| || Sbjct 4361 ACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCGTCCTCG 4420 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || |||||||| |||| ||||||||||| ||||| | |||||||||||| Sbjct 4421 AGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGG 4480 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | | ||||| | ||| ||||| | |||||||||||| Sbjct 4481 ATCTTGGCCTTGACATTCTCGATGGTGTCCGAAGACTCGACCTCGAGGGTAATCGTCTTA 4540 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 ||||| || ||||| || || | ||||||| Sbjct 4541 CCCGTAAGGGTCTTGACGAACACTTGCATG 4570 >seq218 Length=82981 Score = 118 bits (130), Expect = 8e-22 Identities = 154/211 (73%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGG--CGATCGTCGT 45185 |||| ||||||||| ||||||||| |||||||||||| || | | | | | ||| Sbjct 230 ACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCCCTCCGGACCAACAGCGT 171 Query 45186 CCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCG 45245 || || || ||||| || |||| ||||||||||| ||||||| ||||||||||||| Sbjct 170 --AGCTGCTTGCCGGCAAAGATCAGACGCTGTTGGTCCGGAGGCATACCCTCCTTGTCCT 113 Query 45246 CAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCT 45305 || || ||| || | | | ||||| ||| ||||| | ||| ||||||| Sbjct 112 GGATCTTGGCCTTGACGTTCTCAATCGTGTCCGAGGACTCGACCTCGAGGGTGATCGTCT 53 Query 45306 TGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 | ||||| |||||||| ||||||| ||||| Sbjct 52 TACCCGTAAGAGTCTTGACAAAGACCTGCAT 22 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395073779581195