Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20japonica_20[genbank_20GCA_5F001264785.1_202015-08-11] 295 sequences; 8,341,760 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq262 107 2e-18 >seq262 Length=46027 Score = 107 bits (118), Expect = 2e-18 Identities = 378/588 (64%), Gaps = 8/588 (1%) Strand=Plus/Plus Query 33582 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGT 33641 || || || ||| ||||||||||||||| | || | ||||| || || | ||| Sbjct 4922 CACGCAAAGTCGGTGTGCAGACCCTCGTCACGCGAGATGAGCTCGTTCGAGAAGGCGAGA 4981 Query 33642 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAG 33701 || ||||| ||||| ||||| || |||||||| || || || || || || || |||||| Sbjct 4982 CCCGGCATCAGGCCGCGCTTCTTCAGCCAAAAGATCGAGGCAAAGGAGCCCGAGAAGAAG 5041 Query 33702 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAAC----CGGCGCTGTCATG 33757 || || || || || |||||||| | || | ||| | | ||| || || ||| | Sbjct 5042 ATGCCCTCGACCGCGGCAAAGGCCACGAGGCGCTC-CGAGAACGAGGCGCGGCGGTCGTT 5100 Query 33758 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 33817 ||||| | ||||| |||||||| | || || || || || || ||||| || Sbjct 5101 GATCCAGCGCAGCGCCCACTCGGCCTTTTGCTTCACCACGGGGATGGTCTCGATGGCGTT 5160 Query 33818 AAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACAT 33877 ||||| ||| || | || | || || ||||||| || || | Sbjct 5161 GAAGAGGAAGTCGCGTTGGTCGGGCTCGCGGATGTAGGTGTCGATCAGGAGCGAGTAGGT 5220 Query 33878 TTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAAT 33937 ||||| || ||||| || || ||||| || |||||||| || | ||||||| Sbjct 5221 CTCCGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAGCGGGCCTCGGCGGC 5280 Query 33938 CTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGC 33997 |||||| || | | || || || | || || ||||| || || || || || Sbjct 5281 CTGCACCTCGGACGAGAAGCGCTCGAGGAGGTTCTCGTTCACGATACCGTCCGACGCGGC 5340 Query 33998 AAAAAACGCCAATACATGTTTTATAAA---ATATTTTTCGTCTGGTGTTAGTTTATTCCA 34054 ||| ||||| | || || | | ||| | | | ||| | | | || | ||| Sbjct 5341 AAAGAACGCAAGGACGTGGCTCACAAAGTGACGCTCGTTGTCCGTCATGCGGTTGTCCCA 5400 Query 34055 ATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTT 34114 || | | || || || | || | || || | ||||| || || ||||| ||||| Sbjct 5401 GTCGTGCAGGTCCTTGGAGAGGTCAATCTCCTCGGCGGTCCAGAACGAGGCCTCGGCCTT 5460 Query 34115 TTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAA 34162 || ||||| | |||||| || || || |||| ||||| | ||||| Sbjct 5461 CTTGTACATCTGCCAGATCTCGTGGTAGCGGATGGGGAAGAGCACAAA 5508 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629815277547600