Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20japonica_20[genbank_20GCA_5F001264785.1_202015-08-11] 295 sequences; 8,341,760 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq262 87.8 2e-12 >seq262 Length=46027 Score = 87.8 bits (96), Expect = 2e-12 Identities = 168/246 (68%), Gaps = 5/246 (2%) Strand=Plus/Plus Query 36158 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 36217 || || || ||| ||| ||||||||||| | || | ||||| || || | ||| Sbjct 4922 CACGCAAAGTCGGTGTGCAGACCCTCGTCACGCGAGATGAGCTCGTTCGAGAAGGCGAGA 4981 Query 36218 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 36277 || ||||| ||||| ||||| || |||||||| || || ||||| || || || ||||| Sbjct 4982 CCCGGCATCAGGCCGCGCTTCTTCAGCCAAAAGATCGAGGCAAAGGAGCCCGAGAAGAAG 5041 Query 36278 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAAC----CGGCACTGTCATG 36333 || || || || || |||||||| | || | ||| | | ||| || | ||| | Sbjct 5042 ATGCCCTCGACCGCGGCAAAGGCCACGAGGCGCTC-CGAGAACGAGGCGCGGCGGTCGTT 5100 Query 36334 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATT 36393 ||||| | ||||| |||||||| | || || || || ||||| || || || Sbjct 5101 GATCCAGCGCAGCGCCCACTCGGCCTTTTGCTTCACCACGGGGATGGTCTCGATGGCGTT 5160 Query 36394 AAAGAG 36399 ||||| Sbjct 5161 GAAGAG 5166 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658170372987800