Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20japonica_20[genbank_20GCA_5F001264785.1_202015-08-11] 295 sequences; 8,341,760 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq262 104 3e-17 >seq262 Length=46027 Score = 104 bits (114), Expect = 3e-17 Identities = 377/588 (64%), Gaps = 8/588 (1%) Strand=Plus/Plus Query 42065 CATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGT 42124 || || || ||| |||||||||||| || | || | ||||| || || | ||| Sbjct 4922 CACGCAAAGTCGGTGTGCAGACCCTCGTCACGCGAGATGAGCTCGTTCGAGAAGGCGAGA 4981 Query 42125 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAG 42184 || ||||| ||||| ||||| || |||||||| || || ||||| || || || |||||| Sbjct 4982 CCCGGCATCAGGCCGCGCTTCTTCAGCCAAAAGATCGAGGCAAAGGAGCCCGAGAAGAAG 5041 Query 42185 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAAC----CGGCACTGTCATG 42240 || || || || || |||||||| | || | ||| | | ||| || | ||| | Sbjct 5042 ATGCCCTCGACCGCGGCAAAGGCCACGAGGCGCTC-CGAGAACGAGGCGCGGCGGTCGTT 5100 Query 42241 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 42300 ||||| | ||||| |||||||| | || || || || || || ||||| || Sbjct 5101 GATCCAGCGCAGCGCCCACTCGGCCTTTTGCTTCACCACGGGGATGGTCTCGATGGCGTT 5160 Query 42301 AAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACAT 42360 ||||| ||| || | || | || || ||||||| || || | Sbjct 5161 GAAGAGGAAGTCGCGTTGGTCGGGCTCGCGGATGTAGGTGTCGATCAGGAGCGAGTAGGT 5220 Query 42361 TTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAAC 42420 || || || ||||| || || ||||| || |||||||| || | |||||||| | Sbjct 5221 CTCCGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAGCGGGCCTCGGCGGC 5280 Query 42421 CTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGC 42480 ||| || || | | || || || | || |||||||| || ||||| || || Sbjct 5281 CTGCACCTCGGACGAGAAGCGCTCGAGGAGGTTCTCGTTCACGATACCGTCCGACGCGGC 5340 Query 42481 AAAAAACGCCAATACATGTTTTATAAA---ATATTTTTCGTCCGGTGTTAATTTATTCCA 42537 ||| ||||| | || || | | ||| | | | ||||| | || | ||| Sbjct 5341 AAAGAACGCAAGGACGTGGCTCACAAAGTGACGCTCGTTGTCCGTCATGCGGTTGTCCCA 5400 Query 42538 ATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTT 42597 || | | || || || | || | || || | ||||| || || || || ||||| Sbjct 5401 GTCGTGCAGGTCCTTGGAGAGGTCAATCTCCTCGGCGGTCCAGAACGAGGCCTCGGCCTT 5460 Query 42598 TTTATACATATTCCAGATATCATGATATTGAATTGGGAAAATAACAAA 42645 || ||||| | |||||| || || || | || ||||| | ||||| Sbjct 5461 CTTGTACATCTGCCAGATCTCGTGGTAGCGGATGGGGAAGAGCACAAA 5508 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671136725174200