Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20japonica_20[genbank_20GCA_5F001264785.1_202015-08-11] 295 sequences; 8,341,760 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq262 268 1e-66 seq246 187 4e-42 >seq262 Length=46027 Score = 268 bits (296), Expect = 1e-66 Identities = 599/886 (68%), Gaps = 29/886 (3%) Strand=Plus/Minus Query 124995 CTGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTT 125054 || || |||||| | || || || || ||| | |||||||| ||||| ||||||| || Sbjct 5502 CTCTTCCCCATCCGCTACCACGAGATCTGGCAGATGTACAAGAAGGCCGAGGCCTCGTTC 5443 Query 125055 TGGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACT 125114 ||||| | ||| ||| | || || |||||||||||| |||| ||||| | || |||| Sbjct 5442 TGGACCGCCGAGGAGATTGACCTCTCCAAGGACCTGCACGACTGGGACAACCGCATGACG 5383 Query 125115 GAAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATC 125174 || | ||||| | ||| | ||| | | || |||||||||| || || || ||| Sbjct 5382 GACAACGAGCGTCACTTTGTGAGCCACGTCCTTGCGTTCTTTGCCGCGTCGGACGGTATC 5323 Query 125175 GTCAACGACAATCTGTTGACACGATTCTCTCAAGAGTTGACCATTCCA--GAGGTGTCGT 125232 || ||||| || || | || ||||| ||| || || || |||| | Sbjct 5322 GTGAACGAGAACCTCCTCGAGCGCTTCTCGTCCGAGGTG--CAGGCCGCCGAGGCCCGCT 5265 Query 125233 GCTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGA 125292 |||| ||||| ||||| |||||||| |||||| | |||||||| | ||||| |||| Sbjct 5264 GCTTCTACGGTTTCCAGATCATGATGGAGAACATCCACTCGGAGACCTACTCGCTCCTGA 5205 Query 125293 TTGACATGTACATTCGCGATCCGCAACGTAAAC-ACATGCTCTTTAACGCAATCGACACG 125351 | |||| ||||| ||||| || | || | | || | ||||| ||||| ||||| || Sbjct 5204 TCGACACCTACATCCGCGAGCC-CGACCAACGCGACTTCCTCTTCAACGCCATCGAGACC 5146 Query 125352 GTGCC-GTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTC 125410 | || || | | |||| ||| | |||| | | || |||||| | ||| | | Sbjct 5145 ATCCCCGTGGTGAAGCAAAA-GGCCGAGTGGGCGCTGCGCTGGATCAACGACCGCCGCGC 5087 Query 125411 TTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAG 125470 |||| | | || | || ||||| || ||||| || |||||||||||||| ||||| Sbjct 5086 CTCGTTCTCGGAGCGCCTCGTGGCCTTTGCCGCGGTCGAGGGCATCTTCTTCTCGGGCTC 5027 Query 125471 TTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAA 125530 ||||| | ||||||||||| ||||||||||| || ||||| || || | | || Sbjct 5026 CTTTGCCTCGATCTTTTGGCTGAAGAAGCGCGGCCTGATGCCGGGTCTCGCCTTCTCGAA 4967 Query 125531 CGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAA 125590 |||| | || || || |||||||| || ||| |||||||| || || ||| || | Sbjct 4966 CGAGCTCATCTCGCGTGACGAGGGTCTGCACACCGACTTTGCGTGCCTGCTCTTTGGCCA 4907 Query 125591 CTATCTGCGTCCCGAGTGCAGATC--CAGCGATGAA-AAGGTCATCAACATTGTAACCGA 125647 | || | || | ||| | || || |||| ||| ||||| ||||| Sbjct 4906 C-CTC-AAGAAGCGCGCGCACCCCGACACCG-TGAACAAGATCATC---------ACCGA 4859 Query 125648 TGCCGTGAGGATAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCAT 125707 ||||| ||| || ||||| ||| | || || | || ||||| | |||||||| Sbjct 4858 GGCCGTCTCGATCGAGCAAGACTTTTTGACGGATGCGCTCCCGGTGTCGCTCATTGGCAT 4799 Query 125708 GAACTGCAAGCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTT 125767 |||| | || |||||| ||||||| |||||||| || || || || || || Sbjct 4798 GAACGCCCGTCTGATGTGCCAGTACATTGAGTTTGTTGCGGACCGCCTGCTTGTCG---C 4742 Query 125768 GATTGGCCGC---AAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATC 125824 | | ||| | ||| |||||| | | ||| ||||| || || ||| | ||| || Sbjct 4741 GCTCGGCAACTCGAAGCACTACAACTCGACGAACCCCTTCGACTTTATGGAGAACATCTC 4682 Query 125825 ACTAGAGGGTAAGACCAACTTTTTCGAGAAGAAGGTCAGCGAGTAC 125870 || |||| ||| | |||||||||||| |||||| ||| ||| Sbjct 4681 GCTCCAGGGCAAGTCGAACTTTTTCGAGCGCAAGGTCGCCGACTAC 4636 >seq246 Length=57307 Score = 187 bits (206), Expect = 4e-42 Identities = 351/511 (69%), Gaps = 4/511 (1%) Strand=Plus/Minus Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935 ||||| ||||| || || || || || | ||| | ||| | || || |||||| ||||| Sbjct 36637 CAGGGTGGCAACAAGCGCCCTGGTGCGTTTGCCATTTACCTTGAGCCGTGGCACTCGGAC 36578 Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995 || ||||| || || || | ||||| ||| || || |||| || || | ||| Sbjct 36577 GTCTTTGAGTTCATTGACCTCCGCAAGAACCACGGTAAGGAGGAGGTTCGTGCGCGCGAC 36518 Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTAC 97055 | || || || || ||||| || ||| ||||||||||||| ||| | | ||||| || Sbjct 36517 CTTTTCTACGCCCTATGGGTCCCTGATCTGTTCATGAAGCGTGTCGAGCAGGGTGGTGAC 36458 Query 97056 TGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTT 97115 |||| || |||||||| | | || || || || | || |||| ||||| ||||| Sbjct 36457 TGGACGCTGATGTGCCCTGCCGAGTGCCCTGGCCTCGCGGACTGCTACGGCGAGGAGTTC 36398 Query 97116 GAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCG-ATACGTGAGACGAGTCGATGCACG 97174 |||| ||| | |||||||| |||||||| ||| ||| ||| | || | Sbjct 36397 GAGGAGCTCTACGAGCGCTACGAGCGCGAGGGCCGCGGCCGTCGTACG-GTCAAGGCGC- 36340 Query 97175 AGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCT 97233 |||| || ||| | || || | ||| ||| | ||||| || || || | ||||||| Sbjct 36339 AGAAGCTCTGGTACGCGGTCCTTGAGGCGCAGATCGAGACGGGTACCCCCTTTATTCTCT 36280 Query 97234 ACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCA 97293 |||||||| | | || ||||| |||||||| || |||| |||||| || | Sbjct 36279 ACAAGGATGCTGCCAACCGCAAGAGCAACCAGAAGAACGTGGGTGTGATCAAGTCGTCGA 36220 Query 97294 ATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGTTCTGG 97353 | ||||||||||| ||| | |||||| ||| ||||| ||||| || || ||| |||| Sbjct 36219 ACCTGTGCACGGAGATTATCGAGTACAGCTCGCCGGATGAGACCGCCGTGTGCAACCTGG 36160 Query 97354 CATCGGTCAATCTGCCCAAGTTTGTAGAGGG 97384 | ||| | ||||| | ||| | ||||| Sbjct 36159 CCTCGATTGCCCTGCCTACCTTTATTGAGGG 36129 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741056467344200