Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20japonica_20[genbank_20GCA_5F001264785.1_202015-08-11] 295 sequences; 8,341,760 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq61 161 2e-35 seq219 136 6e-28 >seq61 Length=19930 Score = 161 bits (178), Expect = 2e-35 Identities = 194/261 (74%), Gaps = 2/261 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 |||||||| || |||| ||||| | || || |||||||| || || |||||||| ||||| Sbjct 5965 GCTAAGCGCCACCGCAAGATCT-TGCGTGACAACATCCAGGGTATTACCAAGCCCGCTAT 5907 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| ||||| ||||| |||||||| ||||||||| |||| || || |||| || |||| Sbjct 5906 CCGCCGTCTCGCTCGCCGTGGTGGTGTCAAGCGTATCTCCGGTCTGATCTACGACGAGAC 5847 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | ||| | ||| ||||||| ||| ||| |||| ||| | || ||| || || Sbjct 5846 CCGCGGTGTCCTCAAGCTCTTCCTTGAGAGCGTCATCCGTGACTCGGTCACCTACACTGA 5787 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || ||||||||||| || | || || |||| || | || || || || Sbjct 5786 GCACGCCAAGCGCAAGACTGTCACTTCGCTTGACGTCATCTACGCGCTCAAGCGCCAGGG 5727 Query 16672 CCGTAAGATTTATGGTTTTGG 16692 ||| | | || ||||| || Sbjct 5726 CCGCACCCTCTACGGTTTCGG 5706 >seq219 Length=148728 Score = 136 bits (150), Expect = 6e-28 Identities = 186/257 (72%), Gaps = 2/257 (1%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| ||||| || |||| ||| ||| || || |||||||| || ||||||||||| || | Sbjct 79714 CGCGAAGCGCCACCGCAAGAT-TCTGCGCGACAACATCCAGGGTATCACCAAGCCCGCGA 79656 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 |||| || || ||||| ||||| || || |||||| |||| || || |||| || |||| Sbjct 79655 TCCGCCGCCTCGCTCGCCGTGGCGGTGTGAAGCGTATCTCGGGCCTGATCTACGACGAGA 79596 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 |||| || | ||| |||||||| ||| ||| |||| || | | ||| |||| Sbjct 79595 CGCGTGGCGTGCTCAAGCTCTTCCTCGAGAGCGTCATCCGCGACTCGGTGACCTACACCG 79536 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 ||||||| || || ||||| ||||| || | || | |||| || |||| || || | Sbjct 79535 AGCACGCGAAGCGCAAGACGGTCACTTCGCTCGACGTGATCTACGCGCTGAAGCGCCAGG 79476 Query 16671 GCCGTAAGATTTATGGT 16687 | || | | | || ||| Sbjct 79475 GACGCACGCTGTACGGT 79459 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074930279435