Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20japonica_20[genbank_20GCA_5F001264785.1_202015-08-11] 295 sequences; 8,341,760 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq262 107 2e-18 >seq262 Length=46027 Score = 107 bits (118), Expect = 2e-18 Identities = 378/588 (64%), Gaps = 8/588 (1%) Strand=Plus/Plus Query 33304 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 33363 || || || ||| ||||||||||||||| | || || ||||| || || | ||| Sbjct 4922 CACGCAAAGTCGGTGTGCAGACCCTCGTCACGCGAGATGAGCTCGTTCGAGAAGGCGAGA 4981 Query 33364 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAG 33423 || ||||| ||||| ||||| || |||||||| || || || || || || || |||||| Sbjct 4982 CCCGGCATCAGGCCGCGCTTCTTCAGCCAAAAGATCGAGGCAAAGGAGCCCGAGAAGAAG 5041 Query 33424 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAAC----CGGCGCTGTCATG 33479 || || || || || |||||||| | || | ||| | | ||| || || ||| | Sbjct 5042 ATGCCCTCGACCGCGGCAAAGGCCACGAGGCGCTC-CGAGAACGAGGCGCGGCGGTCGTT 5100 Query 33480 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 33539 ||||| | ||||| |||||||| | || || || || || || ||||| || Sbjct 5101 GATCCAGCGCAGCGCCCACTCGGCCTTTTGCTTCACCACGGGGATGGTCTCGATGGCGTT 5160 Query 33540 AAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACAT 33599 ||||| ||| || | || | || || ||||||| || || | Sbjct 5161 GAAGAGGAAGTCGCGTTGGTCGGGCTCGCGGATGTAGGTGTCGATCAGGAGCGAGTAGGT 5220 Query 33600 TTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAAT 33659 ||||| || ||||| || || ||||| || |||||||| || | ||||||| Sbjct 5221 CTCCGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAGCGGGCCTCGGCGGC 5280 Query 33660 CTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGC 33719 ||| || || | | || || || | || || ||||| || ||||| || || Sbjct 5281 CTGCACCTCGGACGAGAAGCGCTCGAGGAGGTTCTCGTTCACGATACCGTCCGACGCGGC 5340 Query 33720 AAAAAACGCCAATACATGTTTTATAAA---ATATTTTTCGTCTGGTGTTAGTTTATTCCA 33776 ||| ||||| | || || | | ||| | | | ||| | | | || | ||| Sbjct 5341 AAAGAACGCAAGGACGTGGCTCACAAAGTGACGCTCGTTGTCCGTCATGCGGTTGTCCCA 5400 Query 33777 ATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTT 33836 || | | || || || | || | || || | ||||| || || ||||| ||||| Sbjct 5401 GTCGTGCAGGTCCTTGGAGAGGTCAATCTCCTCGGCGGTCCAGAACGAGGCCTCGGCCTT 5460 Query 33837 TTTATACATGTTCCAGATGTCATAATATTGGATTGGGAAAATAACAAA 33884 || ||||| | |||||| || | || |||| ||||| | ||||| Sbjct 5461 CTTGTACATCTGCCAGATCTCGTGGTAGCGGATGGGGAAGAGCACAAA 5508 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622944902882200