Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20japonica_20[genbank_20GCA_5F001264785.1_202015-08-11] 295 sequences; 8,341,760 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq57 113 4e-20 seq294 86.0 5e-12 seq218 84.2 2e-11 >seq57 Length=21272 Score = 113 bits (124), Expect = 4e-20 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 24996 ACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCG 25055 || |||||| | ||||| ||||| | ||||| || | ||||| |||| || ||||| Sbjct 522 ACTATGCAAGTCTTTGTTAAGACCCTTACCGGAAAGACAATCACCCTCGAGGTCGAGTCT 463 Query 25056 TCTGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 || ||||| || ||| | ||| || ||| ||||| || || ||||| || ||| Sbjct 462 TCGGACACGATTGAGAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGAC 403 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 |||||||| | || ||||||||||| || | || |||| ||||| || |||| ||| Sbjct 402 CAACAGCGCCTGATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACGCTGAGCGACTAC 343 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || || || || ||||| || | ||||| Sbjct 342 AACATCCAGAAGGAGTCGACGCTGCACCTGGTGCT 308 >seq294 Length=28318 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||| | || || ||||| | || ||||| | || || |||| || ||||| || Sbjct 4569 ATGCAAGTGTTCGTCAAGACCCTTACGGGTAAGACGATTACCCTCGAGGTCGAGTCTTCG 4510 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| |||||| | ||| || ||| ||||| || || ||||| || |||||| Sbjct 4509 GACACCATCGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAA 4450 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || || |||||||| || | || || | |||||| | || ||||| Sbjct 4449 CAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACTCTTTCGGACTACAAC 4390 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || || || || || || | ||||| Sbjct 4389 ATCCAGAAGGAGTCGACCCTTCACCTGGTGCT 4358 >seq218 Length=82981 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/213 (69%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| | ||||| |||||| | || ||||| | ||||| |||| || ||||| || Sbjct 22 ATGCAGGTCTTTGTCAAGACTCTTACGGGTAAGACGATCACCCTCGAGGTCGAGTCCTCG 81 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || ||| | ||| || ||| ||||| || || || || || |||||| Sbjct 82 GACACGATTGAGAACGTCAAGGCCAAGATCCAGGACAAGGAGGGTATGCCTCCGGACCAA 141 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTA-GAAGATGATCGCACTGTGGGCGATTACAA 25177 ||||| | || ||||||||||| || || | | || || | | | |||| ||||| Sbjct 142 CAGCGTCTGATCTTTGCCGGCAAGCAGCTACGCTGTTGGTC-CGGAGGGAGCGACTACAA 200 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || || || ||||| || | ||||| Sbjct 201 CATCCAGAAGGAGTCGACGCTGCACCTGGTGCT 233 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433326442050425