Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20japonica_20[genbank_20GCA_5F001264785.1_202015-08-11] 295 sequences; 8,341,760 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq21 102 7e-17 seq57 95.1 1e-14 seq294 91.5 1e-13 seq218 82.4 6e-11 >seq21 Length=392 Score = 102 bits (112), Expect = 7e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||| | || ||| | || || || ||| ||||||| || || || | | | Sbjct 295 ATGCAAATCTTTATCAAGACTCTCACTGGCAAGACGATCACTCTGGAGGTCGAGTCTAGC 236 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | | || || |||| ||||||||||| ||||| || || ||| Sbjct 235 GACACGATCGACATTGTGAAGTCGAAGGTTCAGGACAAGGAGGGCATTCCTCCGGACCAA 176 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || | || || |||||||| ||| | ||||| ||| ||| |||| || |||||| Sbjct 175 CAGCGGTTGATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGTACCCTCTCGGACTACAAC 116 Query 22399 ATTCAAAAAGA 22409 ||||| || || Sbjct 115 ATTCAGAAGGA 105 >seq57 Length=21272 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||| | |||||||| || | ||||| || || |||| || || || || | | Sbjct 519 ATGCAAGTCTTTGTTAAGACCCTTACCGGAAAGACAATCACCCTCGAGGTCGAGTCTTCG 460 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || | |||| || || || ||||||||||| ||||| || || ||| Sbjct 459 GACACGATTGAGAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAA 400 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || ||||||||||| ||| | |||||| |||||| | ||| |||||| Sbjct 399 CAGCGCCTGATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACGCTGAGCGACTACAAC 340 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || || || Sbjct 339 ATCCAGAAGGAGTCGAC 323 >seq294 Length=28318 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||| | || || || || | || ||||| ||| | || || || || || | | Sbjct 4569 ATGCAAGTGTTCGTCAAGACCCTTACGGGTAAGACGATTACCCTCGAGGTCGAGTCTTCG 4510 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || |||| || || || ||||||||||| ||||| || || ||| Sbjct 4509 GACACCATCGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAA 4450 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || |||||||| ||| | ||||| |||||| | || || |||||| Sbjct 4449 CAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACTCTTTCGGACTACAAC 4390 Query 22399 ATTCAAAAAGAATCCACC 22416 || || || || || ||| Sbjct 4389 ATCCAGAAGGAGTCGACC 4372 >seq218 Length=82981 Score = 82.4 bits (90), Expect = 6e-11 Identities = 108/150 (72%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| | ||||| || ||| | || ||||| ||| |||| || || || || || | Sbjct 22 ATGCAGGTCTTTGTCAAGACTCTTACGGGTAAGACGATCACCCTCGAGGTCGAGTCCTCG 81 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || | |||| || || || |||||||||||||| || || || ||| Sbjct 82 GACACGATTGAGAACGTCAAGGCCAAGATCCAGGACAAGGAGGGTATGCCTCCGGACCAA 141 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTA 22368 || ||||| || ||||||||||| ||| || Sbjct 142 CAGCGTCTGATCTTTGCCGGCAAGCAGCTA 171 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419726490946675