Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20japonica_20[genbank_20GCA_5F001264785.1_202015-08-11] 295 sequences; 8,341,760 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq262 105 1e-17 seq216 93.3 9e-14 seq155 87.8 4e-12 >seq262 Length=46027 Score = 105 bits (116), Expect = 1e-17 Identities = 117/156 (75%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 251559 GCGTTCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTT 251618 ||| ||||| || || |||||||||| || ||||| |||||| |||||||||||||| Sbjct 4651 GCGCTCGAAAAAGTTCGACTTGCCCTGGAGCGAGATGTTCTCCATAAAGTCGAAGGGGTT 4710 Query 251619 TGTGGCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTC 251678 || | ||||| ||||| | | ||| || || || | | |||||| || |||||||| Sbjct 4711 CGTCGAGTTGTAGTGCTTCGAGTTGCCGAGCGCGACAAGCAGGCGGTCCGCAACAAACTC 4770 Query 251679 CAGATACTGTCCCATCAGTTCAGAGTTCATGCCAAT 251714 | ||||| | |||||| | |||||||||||| Sbjct 4771 AATGTACTGGCACATCAGACGGGCGTTCATGCCAAT 4806 >seq216 Length=89711 Score = 93.3 bits (102), Expect = 9e-14 Identities = 152/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404 |||| || || || ||||| | ||||||||||| || |||| ||||||||||| ||| Sbjct 29877 GGTGTCGACCTCTGCAACTGTCAGTTCTCGCTCGCCTACGGTGCCAAGATTCTGCTGAAC 29818 Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464 | || ||| | |||||||| |||| || |||||| |||| || || || Sbjct 29817 ACGGCCACTCTCCGTCTTAAGCGTGGTCACCGCTACGGTCTCTGTGGTCGTAACGGTTCG 29758 Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524 |||||| || || ||||||||||| ||||| ||| | || || || || | | | Sbjct 29757 GGTAAGTCGACCCTCATGCGCGCCATCCAGAACGGCCAGGTCGAGGGCTTCCCCAGCCCC 29698 Query 279525 TCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGAC 279563 ||||| | || ||| || ||||||||| ||||| Sbjct 29697 GACGAGGTCCGCACCTGGTACGTCGAGCACGACCTCGAC 29659 Score = 89.7 bits (98), Expect = 1e-12 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 279705 CTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGTGCCGAT 279764 |||||||||||||||||||||||||| ||||| | || ||| | || | ||||| Sbjct 29523 CTGTCGGGTGGTTGGAAGATGAAGCTCGCCCTTGCGCGTGCCGTGCTGTTCAAGGCCGAC 29464 Query 279765 GTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGGCTAGTG 279824 | || ||||| |||||||| || |||||| ||||| || |||||| ||| | Sbjct 29463 ATTCTGCTGCTCGATGAGCCGACGAACCACTTGGACGTCATCAACGTGAAGTGGATCACC 29404 Query 279825 TCCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACGACTCTGGCTTC 279884 |||||| ||||| |||| | | || ||||||| || |||||||| ||| Sbjct 29403 GACTACCTGACCAGCCTGACCGAGACCACCTCGATCATTGTGTCGCACGACTCCAAGTTC 29344 Query 279885 CTAGATGCCGTGTG 279898 || | | |||||| Sbjct 29343 CTGAACGACGTGTG 29330 Score = 87.8 bits (96), Expect = 4e-12 Identities = 139/194 (72%), Gaps = 8/194 (4%) Strand=Plus/Minus Query 280168 TTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCG 280227 ||| ||| | || ||||| ||| |||||||||| ||||| |||| ||| || || Sbjct 29057 TTGCTGTGCTCGGCCCCAACGGTTCGGGTAAGTCGACCCTCGTCAAG---CTGGTTGTCG 29001 Query 280228 A-GACCCAG-GCC--ACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGCTTAC 280283 ||| | | ||| ||| || | | | |||||||| |||||| || || | |||| Sbjct 29000 GTGACACTGAGCCGAACTCGGGTGAGC-TCTGGAAGCACCCCAACCTGGTCATTGGTTAC 28942 Query 280284 GTCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATAC 280343 || || |||||||| ||||||||||| || | ||||| |||| ||||||| | ||| Sbjct 28941 GTGGCCCAGCACGCCTTCCACCACATTGACCAGCACCTCGACAAGACTCCTCTGGAGTAC 28882 Query 280344 ATTCAGTGGCGCTA 280357 || | |||||||| Sbjct 28881 ATGCTCTGGCGCTA 28868 >seq155 Length=100171 Score = 87.8 bits (96), Expect = 4e-12 Identities = 136/192 (71%), Gaps = 8/192 (4%) Strand=Plus/Plus Query 280170 GGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAG 280229 ||||||||||| || || |||||||||||| ||| || ||||| || || || || ||| Sbjct 7581 GGTGTCATTGGCCCGAACGGTGCGGGTAAGAGTACGCTGATCAAGGTGCTCACCGGTGAG 7640 Query 280230 A----CCCAGGCCACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGCTTACGT 280285 | ||| ||| ||||| || ||||| |||||| |||| |||| | | Sbjct 7641 ATTGTCCC---CCA-GGAGGGCAAGGTGGAAAAGCACCCCAACCTGCGTGTGGCGCTCAT 7696 Query 280286 CGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACAT 280345 || |||||||| |||||||| ||||| | |||||||| | ||| | ||| ||||| Sbjct 7697 GGCGCAGCACGCCTTCCACCATCTCGAGCAGCACCTGGAAAAGACCGCGTGCCAGTACAT 7756 Query 280346 TCAGTGGCGCTA 280357 |||||||| Sbjct 7757 CACCTGGCGCTA 7768 Score = 87.8 bits (96), Expect = 4e-12 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 280725 TCTGGAGGCCAGAAGGTCAAACTTGTCATCGGAGCAGCTCTGTGGCAACACCCTCACGTG 280784 || || ||||| |||||||| | || ||| || || |||||| | |||| || ||| Sbjct 8151 TCGGGCGGCCAAAAGGTCAAGGTCGTGCTCGCGGCCGCGCTGTGGAACAACCCCCAGGTG 8210 Query 280785 ATCGTTCTCGACGAGCCTACCAACTATCTGGACCGCGAGAGCCTGGGCGCTCT 280837 |||| ||||||||||| ||||||||||| ||||||||| || |||| ||| Sbjct 8211 CTCGTGCTCGACGAGCCGACCAACTATCTCGACCGCGAGGCGCTCGGCGGTCT 8263 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027832915098095