Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20japonica_20[genbank_20GCA_5F001264785.1_202015-08-11] 295 sequences; 8,341,760 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq294 161 2e-34 seq262 156 8e-33 seq216 93.3 8e-14 >seq294 Length=28318 Score = 161 bits (178), Expect = 2e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | |||| ||| || || ||||| || |||||||| || || || Sbjct 4343 CCACCACGCAGGCGAAGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAA 4402 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| |||||||| || || | |||||||| || ||| Sbjct 4403 AGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGAGGA 4462 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| || ||||| |||||||| |||||||||||| | || || || Sbjct 4463 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCGATGGTGTCCGAAGACTCGACC 4522 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||| || || || ||||| |||||||||||||| | ||||| Sbjct 4523 TCGAGGGTAATCGTCTTACCCGTAAGGGTCTTGACGAACACTTGCAT 4569 >seq262 Length=46027 Score = 156 bits (172), Expect = 8e-33 Identities = 587/898 (65%), Gaps = 41/898 (5%) Strand=Plus/Plus Query 9938 GACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTCGAG 9997 ||| |||||||| ||| || | ||| ||||||||| ||||| |||||||||| ||| Sbjct 4621 GACACCCGCCTTGGCGTAGTCGGCGACCTTGCGCTCGAAAAAGTTCGACTTGCCCTGGAG 4680 Query 9998 GGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACCGAG 10057 || ||| |||||| ||||| ||||||||| | | | ||||| | || ||||| Sbjct 4681 CGAGATGTTCTCCATAAAGTCGAAGGGGTTCGTCGAGTTGTAGTGCTTCGAGTTGCCGAG 4740 Query 10058 TGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTTCAT 10117 || | | |||||| || || ||||| |||||||||| |||||| | |||||| Sbjct 4741 CGCGACAAGCAGGCGGTCCGCAACAAACTCAATGTACTGGCACATCAGACGGGCGTTCAT 4800 Query 10118 GCCAATCATGCGGCA-GGGGATGGCGTC--GCAAATGAAGTCCTTTTCGTTGGCGACCGC 10174 |||||| | ||| || |||| || || |||| ||||| | ||| | | ||| | Sbjct 4801 GCCAATGA-GCGACACCGGGAGCGCATCCGTCAAA--AAGTCTTGCTCGATCGAGACGG- 4856 Query 10175 TTCCTCGACGATGCTCTTTACCAC---GTCAAGGGACAGCTTG-TTCTCGAGCTTCGAAT 10230 ||||| |||| |||| ||| ||| ||| || | |||| ||| | | Sbjct 4857 --CCTCGGTGATGATCTTGTTCACGGTGTC-GGGGTGCGCGCGCTTCTTGAGGTGGCCAA 4913 Query 10231 ACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACA 10290 | || || |||| | ||| || |||||||| || ||||| |||||| || | Sbjct 4914 AGAGCAGGCACGCAAAGTCGGTGTGCAGACCCTCGTCACGCGAGATGAGCTCGTTCGAGA 4973 Query 10291 AACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCGG 10350 | | ||||| ||||| || || || || |||||| || || | | || || || | Sbjct 4974 AGGCGAGACCCGGCATCAGGCCGCGCTTCTTCAGCCAAAAGATCGAGGCAAAGGAGCCCG 5033 Query 10351 AGAACAGAAGA--CCCTCCACGCACACCCAGGCGACGAGGCGCTCTGCGAAGGA-GCG-G 10406 ||| |||||| ||||| || | |||| ||||||||||| | ||| || ||| | Sbjct 5034 AGA--AGAAGATGCCCTCGACCGCGGCAAAGGCCACGAGGCGCTCCGAGAACGAGGCGCG 5091 Query 10407 TCGCGCGAAAAGTATTTCG-AG-GCCCACGCTGCCTT---CTTTCCCACGGCAGGGATCG 10461 || || | | || || |||||| | ||||| ||| ||||| ||||| | Sbjct 5092 GCGGTCGTTGA-TCCAGCGCAGCGCCCACTCGGCCTTTTGCTTCACCACG---GGGATGG 5147 Query 10462 TCTCGATAGCCTCGAAGAGCTTGTTAC---GCTCGGTCTCGTCCTCAATAAGAGCATCAA 10518 ||||||| || | |||||| || | | |||| |||| | | || | || | Sbjct 5148 TCTCGATGGCGTTGAAGAGGAAGTCGCGTTGGTCGGGCTCG--CGGATGTAG-GTGTCGA 5204 Query 10519 GGAGCAGGGAGTATTGCTCGCTGTGGACGCTCTCATTGTACCCCTGGTAAGCGTAGAACA 10578 || || ||||| ||| ||||| | |||| | |||| || ||||||| Sbjct 5205 TCAGGAGCGAGTAGGTCTCCGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGC 5264 Query 10579 TACGTGCCGAGGGGTCCGTGACTTCCTCGGCAAAGTTGTTGTTCAGGTTCTCCATCACCA 10638 || ||| || | || || || | ||| | | |||||||| |||| | Sbjct 5265 AGCGGGCCTCGGCGGCCTGCACCTCGGACGAGAAGCGCTCGAGGAGGTTCTCGTTCACGA 5324 Query 10639 TGCCATCGCTGCCTGCAAAGAAGCCGAGGATGTGCTTGATGAAGTGGCGCTCATCATCGT 10698 | || || | |||||||| | |||| ||| | | ||||| ||||| | || Sbjct 5325 TACCGTCCGACGCGGCAAAGAACGCAAGGACGTGGCTCACAAAGTGACGCTCGTTGTCCG 5384 Query 10699 TCA---GTTTTTCACGCCAGTCTACCACATCCTGGTTGAGCTGGACCTCCTCCACGGTCC 10755 ||| | || || |||||| || |||| | ||| | | |||||| |||||| Sbjct 5385 TCATGCGGTTGTC---CCAGTCGTGCAGGTCCTTGGAGAGGTCAATCTCCTCGGCGGTCC 5441 Query 10756 AGAAAGTGGCAACGGCCTTCTTGTACATCTGGAAAATGTCGGGGTACCGGATGGGGAA 10813 |||| | ||| ||||||||||||||||||| | || ||| |||| ||||||||||| Sbjct 5442 AGAACGAGGCCTCGGCCTTCTTGTACATCTGCCAGATCTCGTGGTAGCGGATGGGGAA 5499 >seq216 Length=89711 Score = 93.3 bits (102), Expect = 8e-14 Identities = 180/265 (68%), Gaps = 3/265 (1%) Strand=Plus/Plus Query 225368 ACGAAAGCAGACAGGTTTCCGAGGTGCTTCGTGAGCTTGAGGTTCTTCTCGTAATGAACA 225427 ||||||||| ||||| ||| ||| | ||| ||||| | ||| || | | | Sbjct 29264 ACGAAAGCATCAAGGTTACCGGGGTAACGCTTGATCTTGAAGCGGTTCAGGT---GGAGA 29320 Query 225428 ATTGCCGAGCACACTGCGTCAAGGAAGCCAGAGTCGTGGGACACAATGATGGACGACACG 225487 || | | ||||| ||| ||||| |||||||| ||||||||||| || | Sbjct 29321 ATGTCGGTACACACGTCGTTCAGGAACTTGGAGTCGTGCGACACAATGATCGAGGTGGTC 29380 Query 225488 TTCGTCAGGCCCTTGAGGTGCGTGATGAGCCATGCCACGTTGCTGACGTCCATGTGGTTT 225547 | ||||||| | |||| | ||| ||| ||||||| ||||||||| |||||| Sbjct 29381 TCGGTCAGGCTGGTCAGGTAGTCGGTGATCCACTTCACGTTGATGACGTCCAAGTGGTTC 29440 Query 225548 GTAGGTTCGTCCAGAAGCAGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGC 225607 || || || || || ||||| ||||| || | | || | ||| |||| || | ||| Sbjct 29441 GTCGGCTCATCGAGCAGCAGAATGTCGGCCTTGAACAGCACGGCACGCGCAAGGGCGAGC 29500 Query 225608 TTCATTTTCCAGCCCCCGGACAGGG 225632 ||||| ||||| || || ||||||| Sbjct 29501 TTCATCTTCCAACCACCCGACAGGG 29525 Score = 84.2 bits (92), Expect = 4e-11 Identities = 97/127 (76%), Gaps = 4/127 (3%) Strand=Plus/Plus Query 224498 AGCGCGCCAAGCGACTCGCGGTCAAGGAAGTTCGTCGGCTCATCCAGGATGATAACGTGG 224557 ||||| |||||||||| ||||| | |||||| || ||||| ||||| | || | |||| Sbjct 28373 AGCGCAGCAAGCGACTCACGGTCCAAGAAGTTGGTGGGCTCGTCCAGCACAATGATGTGG 28432 Query 224558 GGGCACTGCCACAGG--GCTGCACCAACCACCAGCTTCACCTTCTGACCGCCAGAGAGGC 224615 || || ||| |||| || ||||| | || | ||| ||||||||||| || ||||| | Sbjct 28433 GG-CA-TGCGCCAGGTGGCGGCACCCAGGACGACCTTGACCTTCTGACCACCCGAGAGAC 28490 Query 224616 CGCGGAT 224622 |||| || Sbjct 28491 CGCGCAT 28497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921619001517400