Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20japonica_20[genbank_20GCA_5F001264785.1_202015-08-11] 295 sequences; 8,341,760 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq57 104 2e-17 seq21 84.2 2e-11 seq294 82.4 6e-11 >seq57 Length=21272 Score = 104 bits (114), Expect = 2e-17 Identities = 158/220 (72%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGT-CG 33968 || ||||||||||| || ||||| ||||||||| |||||||| || || | || || Sbjct 302 AGGCGCAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTC-GCTCAGCGTGCG 360 Query 33969 CTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTC 34028 | || || | |||||||||||||| ||||||||||| || ||| || | || ||| Sbjct 361 GCCATCCTCGAGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGAGGAATGCCCTC 420 Query 34029 TTTGTCCATAATTTTTTGCTTAATGGAACTCACAC-TATCAGTAGATTCGCATTCGACCG 34087 |||||| || || ||| | | |||| | | || | ||| ||| |||| | Sbjct 421 CTTGTCCTGGATCTTGGCCTTGA-CGTTCTCAATCGTGTCCGAAGACTCGACCTCGAGGG 479 Query 34088 TTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127 | ||||| |||||||| || || || ||||||| |||||| Sbjct 480 TGATTGTCTTTCCGGTAAGGGTCTTAACAAAGACTTGCAT 519 >seq21 Length=392 Score = 84.2 bits (92), Expect = 2e-11 Identities = 93/124 (75%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 33912 CCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTCGCTC 33971 ||| ||||| || || |||||||||||||||||||||||||| || | | || | Sbjct 80 CCGAAGCACAAGGTGGAGCGTGCTCTCCTTCTGAATGTTGTAGTCCGAGAGGGTACGGCC 139 Query 33972 GTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTCTTT 34031 ||| |||| ||||||||||| || |||| ||||| || ||| || | || ||| || Sbjct 140 GTCCTCCAGCTGCTTGCCGGCGAAGATCAACCGCTGTTGGTCCGGAGGAATGCCCTCCTT 199 Query 34032 GTCC 34035 |||| Sbjct 200 GTCC 203 >seq294 Length=28318 Score = 82.4 bits (90), Expect = 6e-11 Identities = 102/137 (74%), Gaps = 2/137 (1%) Strand=Plus/Plus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 ||| || | ||| || |||||||| ||||| || ||||||||| |||||||| || | Sbjct 4342 ACCACCACGCAGGCGAAGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGA 4401 Query 33960 CA-ATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCG 34018 | | || || |||| || | ||||||||||| || ||||||||||| || ||| | Sbjct 4402 AAGAGTGCGGC-CGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGAG 4460 Query 34019 GCACGCTCTCTTTGTCC 34035 | | || ||| |||||| Sbjct 4461 GAATGCCCTCCTTGTCC 4477 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397060972436590