Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20japonica_20[genbank_20GCA_5F001264785.1_202015-08-11] 295 sequences; 8,341,760 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq21 105 2e-17 seq294 104 6e-17 seq41 91.5 3e-13 seq218 87.8 4e-12 >seq21 Length=392 Score = 105 bits (116), Expect = 2e-17 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 288261 AAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTC 288320 ||| || || || | |||||| || || || || || ||||| | ||| || || ||||| Sbjct 83 AAGCACAAGGTGGAGCGTGCTCTCCTTCTGAATGTTGTAGTCCGAGAGGGTACGGCCGTC 142 Query 288321 TTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATC 288380 || | || || || |||||||||| |||||||| || || || || || || Sbjct 143 CTCCAGCTGCTTGCCGGCGAAGATCAACCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTC 202 Query 288381 CTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGT 288440 ||| | |||| ||||| | || || | ||||| || || || || || |||||||| Sbjct 203 CTGAACCTTCGACTTCACAATGTCGATCGTGTCGCTAGACTCGACCTCCAGAGTGATCGT 262 Query 288441 CTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||| || || |||||||||| || || ||||| Sbjct 263 CTTGCCAGTGAGAGTCTTGATAAAGATTTGCAT 295 >seq294 Length=28318 Score = 104 bits (114), Expect = 6e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||| || || |||| || || || ||||| || ||||| | Sbjct 4343 CCACCACGCAGGCGAAGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAA 4402 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || ||||||||||| |||||||| || Sbjct 4403 AGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGAGGA 4462 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| || || || || || || || | || || || || Sbjct 4463 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCGATGGTGTCCGAAGACTCGACC 4522 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| || |||||||| || || || ||||||||||| | ||||| Sbjct 4523 TCGAGGGTAATCGTCTTACCCGTAAGGGTCTTGACGAACACTTGCAT 4569 >seq41 Length=25600 Score = 91.5 bits (100), Expect = 3e-13 Identities = 234/349 (67%), Gaps = 12/349 (3%) Strand=Plus/Plus Query 325322 ATATATCGTGCACTCGCGTGATCCTTACCACCCTGCAATCTCGAACCGAACTGGCCCTCC 325381 ||||| || || || ||| ||||| || ||| | | | || ||| ||||| || | Sbjct 16934 ATATAACGGGCGCTGGCGGCGTCCTTGCCGCCCATCGAGCGCGTACCAAACTGACCGTTA 16993 Query 325382 GGCAACAACCAGTTGATGTTATTGCTTCCGACATAATCCTGTGCAAGGTTCACGATGGTC 325441 ||| |||| ||| | ||| ||||||||| | | || || || ||| ||||| ||| Sbjct 16994 GGCGACAAGAGGTTCACGTTGTTGCTTCCGCAAAAGTCTTGCGCGAGGCCGACGATCGTC 17053 Query 325442 CCTTGCAGAGATGCTTCGCCATGGTGATAGGCGCTATGCTCTGCAACGTAACCGCTGAAC 325501 | ||| ||| ||||| ||||| ||||| | ||||| | |||||||| || | Sbjct 17054 GCCGAGAGACTTGCCTCGCCGTGGTGGTAGGCAGTGTGCTCCGAGACGTAACCCTGGAGC 17113 Query 325502 TG-TGCAACCTTCACGTCGGTCGTCAAATTGCGCTTGAAAGCTG-AATATATCACTTTCC 325559 || |||| |||| | |||||| | | ||||||||| |||| | | | | |||||| | Sbjct 17114 TGCTGCA-CCTTGATCTCGGTCTTGAGCTTGCGCTTG-AAGCAGCCAAAGAGCACTTTGC 17171 Query 325560 GTTGAGAAGGTTTGAAACCATCAACGACCGACGGAATGCTTCGTTCCAGATCGTACCG-- 325617 | || || || | || || || |||||||| || || | | || ||| Sbjct 17172 GCTGGCCGGGCTTTAGTCCGTCGACCACCGACGGGATCGAGCG---GATGTTGT-CCGCC 17227 Query 325618 --CGAGAACAAAATAAGTTCCTTGTCGATGAAGTCGGGAACGGGAACCT 325664 |||||| | || |||||||||| ||| ||||| | | ||||| || Sbjct 17228 ATCGAGAAGAGGATCAGTTCCTTGTTGATAAAGTCCGAGATGGGAATCT 17276 >seq218 Length=82981 Score = 87.8 bits (96), Expect = 4e-12 Identities = 107/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 288328 TGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATT 288387 || || || || ||||||||||||||||| || || || || || |||||||| Sbjct 167 TGCTTGCCGGCAAAGATCAGACGCTGTTGGTCCGGAGGCATACCCTCCTTGTCCTGGATC 108 Query 288388 TTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCG 288447 || || || ||||| || || | || || || || ||||| ||||||||||| || Sbjct 107 TTGGCCTTGACGTTCTCAATCGTGTCCGAGGACTCGACCTCGAGGGTGATCGTCTTACCC 48 Query 288448 GTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||||||||| || | |||||| Sbjct 47 GTAAGAGTCTTGACAAAGACCTGCAT 22 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179649941275010