Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20japonica_20[genbank_20GCA_5F001264785.1_202015-08-11] 295 sequences; 8,341,760 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq262 129 6e-25 seq57 125 7e-24 seq294 105 6e-18 seq218 102 8e-17 seq21 87.8 2e-12 >seq262 Length=46027 Score = 129 bits (142), Expect = 6e-25 Identities = 272/406 (67%), Gaps = 11/406 (3%) Strand=Plus/Minus Query 47160 GTCGAGGGCGTCTTCTTCTCGGGCAGCTTTGCGGCGATATTTTACATGAAAACCAAAGGA 47219 ||||||||| |||||||||||||| |||||| |||| |||| |||| | || Sbjct 5052 GTCGAGGGCATCTTCTTCTCGGGCTCCTTTGCCTCGATCTTTTGGCTGAAGAAGCGCGGC 4993 Query 47220 GTTATGCCCGGCCTCACGTTTAGCAACGAGCTAATCTCGAGAGACGAAGGCCTGCACACC 47279 | ||||| || ||| | || |||||||| |||||| | ||||| || ||||||||| Sbjct 4992 CTGATGCCGGGTCTCGCCTTCTCGAACGAGCTCATCTCGCGTGACGAGGGTCTGCACACC 4933 Query 47280 AACTTTGCCTGTCTCTACTA----CAACACTAGAGTCGATCAAAAGTTGGACGTGCCCAC 47335 ||||||| || || || || | | ||| || | | || ||| Sbjct 4932 GACTTTGCGTGCCTGCTCTTTGGCCACCTCAAGAAGCGCGC-------GCACCCCGACAC 4880 Query 47336 CGTCAGCGACATGTTTGCCGAAGCCGTCGCCATTGAGATGGAGTTTTTCGCCGAGGCTCT 47395 ||| | | | || | |||| |||||| | || ||| || ||||| | || || || Sbjct 4879 CGTGAACAAGATCATCACCGAGGCCGTCTCGATCGAGCAAGACTTTTTGACGGATGCGCT 4820 Query 47396 GCCCGAATCTTTAGTGGGAATGAACGCGGAGATGATGAGAAAGTACATCGAATTTGTCGC 47455 || | || | | || |||||||| ||||| | ||||||| || ||||| || Sbjct 4819 CCCGGTGTCGCTCATTGGCATGAACGCCCGTCTGATGTGCCAGTACATTGAGTTTGTTGC 4760 Query 47456 CGACCGCCTGCTCGTTCAGCTAAAGTATCCCAAGATTTACCACACCGAGAATCCATTCGA 47515 ||||||||||| || ||| | | ||| ||| || | ||| || ||||| Sbjct 4759 GGACCGCCTGCTTGTCGCGCTCGGCAACTCGAAGCACTACAACTCGACGAACCCCTTCGA 4700 Query 47516 GTTTATGAACAACATTTCGCTCGAGGGCAAGACCAACTTTTTCGAG 47561 |||||| | ||||| |||||| |||||||| | |||||||||||| Sbjct 4699 CTTTATGGAGAACATCTCGCTCCAGGGCAAGTCGAACTTTTTCGAG 4654 >seq57 Length=21272 Score = 125 bits (138), Expect = 7e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | |||| ||||| || | ||| ||||| || || || ||||| |||| | Sbjct 293 CCACCACGGAGGCGCAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTC 352 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| ||| || ||||| || || || |||||| ||||| || || ||||| Sbjct 353 AGCGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGAGGA 412 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||||||||||||||| ||| || ||||| | || | ||||||| | |||||| Sbjct 413 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCAATCGTGTCCGAAGACTCGACC 472 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| ||| | || || ||||| || || || ||||| | ||||| Sbjct 473 TCGAGGGTGATTGTCTTTCCGGTAAGGGTCTTAACAAAGACTTGCAT 519 >seq294 Length=28318 Score = 105 bits (116), Expect = 6e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943 || ||||| || | || | ||||| || | || ||||| || || || ||||| || Sbjct 4340 GCACCACCACGCAGGCGAAGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCC 4399 Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003 | ||||| || || ||||| || || ||| |||||| ||||| || || ||| Sbjct 4400 GAAAGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGA 4459 Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCG 127063 || ||||||||||||||| ||| || ||||| | |||| |||||||| | |||| Sbjct 4460 GGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCGATGGTGTCCGAAGACTCG 4519 Query 127064 ACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 || |||| ||| | ||| || || || || || || || || | |||||| Sbjct 4520 ACCTCGAGGGTAATCGTCTTACCCGTAAGGGTCTTGACGAACACTTGCATG 4570 >seq218 Length=82981 Score = 102 bits (112), Expect = 8e-17 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGC-- 126944 ||||| || | |||| ||||| || | ||| ||||| || || || ||||| |||| Sbjct 248 CCACCACGGAGGCGCAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTC 189 Query 126945 CCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAG 127004 || || | | | ||| ||||| || || || |||||| ||||| || || |||| Sbjct 188 CCTCCGGACCAACAGCGT--AGCTGCTTGCCGGCAAAGATCAGACGCTGTTGGTCCGGAG 131 Query 127005 GTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGA 127064 | || |||||||||||| ||| || ||||| | || | ||||||| ||||| Sbjct 130 GCATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCAATCGTGTCCGAGGACTCGA 71 Query 127065 CTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 | |||| ||| | ||| || || || ||||| || ||||| | |||||| Sbjct 70 CCTCGAGGGTGATCGTCTTACCCGTAAGAGTCTTGACAAAGACCTGCAT 22 >seq21 Length=392 Score = 87.8 bits (96), Expect = 2e-12 Identities = 114/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || ||||| || || ||| ||||||| ||||| || || ||||| |||||||||||| Sbjct 141 TCCTCCAGCTGCTTGCCGGCGAAGATCAACCGCTGTTGGTCCGGAGGAATGCCCTCCTTG 200 Query 127019 TCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACC 127078 ||| | ||| ||| | |||| ||||| || |||||| || | || | | Sbjct 201 TCCTGAACCTTCGACTTCACAATGTCGATCGTGTCGCTAGACTCGACCTCCAGAGTGATC 260 Query 127079 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGC 127116 || ||||| || ||||| || | ||| || |||||||| Sbjct 261 GTCTTGCCAGTGAGAGTCTTGATAAAGATTTGCATGGC 298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475499046590800