Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20japonica_20[genbank_20GCA_5F001264785.1_202015-08-11] 295 sequences; 8,341,760 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq57 104 2e-17 seq246 89.7 5e-13 >seq57 Length=21272 Score = 104 bits (114), Expect = 2e-17 Identities = 163/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | || ||| || |||||||| || ||||| ||||| || || ||| Sbjct 290 ATACCACCACGGAGGCGCAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCG 349 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || | || ||| || | || || || || | |||| || || |||||||| Sbjct 350 CTCAGCGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGA 409 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 |||||||| || || || || || || |||| || | || | ||||| |||||||| Sbjct 410 GGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGTTCTCAATCGTGTCCGAAGACTC 468 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||| ||||| || | || || ||||| || || || ||||| | |||||| Sbjct 469 GACCTCGAGGGTGATTGTCTTTCCGGTAAGGGTCTTAACAAAGACTTGCAT 519 >seq246 Length=57307 Score = 89.7 bits (98), Expect = 5e-13 Identities = 192/283 (68%), Gaps = 8/283 (3%) Strand=Plus/Minus Query 124038 TGCGAACTTGCGAAAATTCACGGCGCGTACGAAAGTTACGCGGGCAGCCCGGCGAGCCGA 124097 ||||| ||||| || || || | |||||| | |||| ||||||||| || | Sbjct 35860 TGCGAGCTTGCCAAGGAGCAGGGTGTGTACGAGACCTACGAGGGCAGCCCTGCCTCGCAG 35801 Query 124098 GGTATTTTGCAGTACGACATGTGGAATGCTACACCGACAAATTTGTGGGACTGGAGCGTT 124157 || || ||||||||||| ||||||| || || || | | ||||||||| || Sbjct 35800 GGCATCCTGCAGTACGACCTGTGGAACAAGACCCCCACGGACCTCTGGGACTGG-GC--- 35745 Query 124158 TTAAAACAACGC--ATATCGAC--GCACGGTTTGCGTAACTCGCTGTTGGTGGCGTACAT 124213 | | ||| || | || | | ||||||| |||| ||||||||| | | ||| || Sbjct 35744 TGAGCTCAAGGCCAAGATTGCCCAGCACGGTCTGCGCAACTCGCTGCTCCTCGCGCCGAT 35685 Query 124214 GCCGACGGCAACCACTGCTCAAATTTTAGGAAACAACGAATCCTTCGAGCCGTTCACTAA 124273 |||||| || | || ||| || | || |||||| | ||||||||| | ||| || Sbjct 35684 GCCGACTGCGTCGACGAGTCAGATCCTCGGCTTCAACGAGTGCTTCGAGCCTTACACGAA 35625 Query 124274 CAATTTGTACGTGCGACGAGTGTTAGCCGGCGATTTTCAAGTG 124316 ||| | ||| |||| || ||| | ||||| || || || ||| Sbjct 35624 CAACATTTACATGCGCCGCGTGCTTGCCGGTGAGTTCCAGGTG 35582 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452001533238200