Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20japonica_20[genbank_20GCA_5F001264785.1_202015-08-11] 295 sequences; 8,341,760 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq294 174 3e-38 seq57 152 1e-31 seq218 107 4e-18 seq21 102 2e-16 seq276 98.7 2e-15 >seq294 Length=28318 Score = 174 bits (192), Expect = 3e-38 Identities = 164/209 (78%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || |||||||| || ||||| || || || ||||| || | |||||| | || || ||| Sbjct 4361 ACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCGTCCTCG 4420 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || || |||||||| ||||||||||| || ||||| || Sbjct 4421 AGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGG 4480 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || |||||| ||||| |||||||||||| || || || ||||||| |||||| Sbjct 4481 ATCTTGGCCTTGACATTCTCGATGGTGTCCGAAGACTCGACCTCGAGGGTAATCGTCTTA 4540 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || |||||||||||||| Sbjct 4541 CCCGTAAGGGTCTTGACGAACACTTGCAT 4569 >seq57 Length=21272 Score = 152 bits (168), Expect = 1e-31 Identities = 159/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || || ||||| || || || ||||| ||| || || | ||||| ||| Sbjct 311 ACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGGCCATCCTCG 370 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || || ||||| || || |||||||| ||||||||||| || ||||| || Sbjct 371 AGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGG 430 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||||||||||||||| ||||||||| || || || ||||| | |||||| Sbjct 431 ATCTTGGCCTTGACGTTCTCAATCGTGTCCGAAGACTCGACCTCGAGGGTGATTGTCTTT 490 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || || || |||||||| Sbjct 491 CCGGTAAGGGTCTTAACAAAGACTTGCAT 519 >seq218 Length=82981 Score = 107 bits (118), Expect = 4e-18 Identities = 113/149 (76%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || || ||||| || || |||||||| ||||| || || || ||||| || Sbjct 170 AGCTGCTTGCCGGCAAAGATCAGACGCTGTTGGTCCGGAGGCATACCCTCCTTGTCCTGG 111 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||||||||||||||| |||||||| || || || ||||| | |||||| Sbjct 110 ATCTTGGCCTTGACGTTCTCAATCGTGTCCGAGGACTCGACCTCGAGGGTGATCGTCTTA 51 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | ||| || || || || ||||| Sbjct 50 CCCGTAAGAGTCTTGACAAAGACCTGCAT 22 >seq21 Length=392 Score = 102 bits (112), Expect = 2e-16 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 |||||||| || ||| ||| || ||||| ||||| || | || || | || || || Sbjct 87 ACAAGGTGGAGCGTGCTCTCCTTCTGAATGTTGTAGTCCGAGAGGGTACGGCCGTCCTCC 146 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| | || |||||||| ||||||||||| || ||||| ||| Sbjct 147 AGCTGCTTGCCGGCGAAGATCAACCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGA 206 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 | || ||| || | || || ||||| | || || || || || | |||||| Sbjct 207 ACCTTCGACTTCACAATGTCGATCGTGTCGCTAGACTCGACCTCCAGAGTGATCGTCTTG 266 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | ||| || | || | |||||| Sbjct 267 CCAGTGAGAGTCTTGATAAAGATTTGCAT 295 >seq276 Length=39448 Score = 98.7 bits (108), Expect = 2e-15 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || || ||||| || || ||||| || ||| || || | ||| |||||| Sbjct 4995 ACGAGGTGCAGGGTCGACTCCTTCTGGATATTATAGTCGCTGAGCGTCCGCCCGTCTTCG 5054 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || || ||||| || || |||||||| |||||||| || || ||||| || Sbjct 5055 AGCTGCTTGCCCGCAAAGATCAGGCGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGG 5114 Query 195052 ATTTTTTGCTTGAC 195065 || || |||||| Sbjct 5115 ATCTTGGCCTTGAC 5128 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109477406506265