Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20japonica_20[genbank_20GCA_5F001264785.1_202015-08-11] 295 sequences; 8,341,760 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq231 96.9 1e-14 seq241 86.0 2e-11 >seq231 Length=67363 Score = 96.9 bits (106), Expect = 1e-14 Identities = 256/389 (66%), Gaps = 4/389 (1%) Strand=Plus/Plus Query 302490 GTCAATTCCGTCATCGCCGTAGGAATACTGAATGATTTTGTTCTTGTTATTTCTTACGGT 302549 ||| || ||||| |||||||||| | ||| || | |||| | || | ||||| Sbjct 24604 GTCGATACCGTCCTCGCCGTAGGCAAACTCGATCACACTGTTGGTCGAGTTGCGCACGGT 24663 Query 302550 CATATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACC 302609 || || | ||| | | ||| || | ||||| | ||| ||||| || ||||| Sbjct 24664 GCCGTCGTAGCAGATCGTCACGTCCTCAAGTGCCTTGACGAGACGGCGCTGGATGTAACC 24723 Query 302610 AGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAA 302669 || | || || || || |||||||| ||||| | ||||| |||| || ||||| Sbjct 24724 CGTCTCGGCCGTCTTGACCGCGGTATCAATCAGACCTTCGCGACCGGCCATGGCGTGGAA 24783 Query 302670 GAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTC 302729 ||| | ||| | || || || | | | ||| | || ||||||||||| ||| Sbjct 24784 GAAGAACTCGTGCGCGGTGAGGCCACGCAGGTACGAGTTTTCCACGAAACCACGGCTCTC 24843 Query 302730 GGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGAT 302789 ||||| |||| |||||||||||| ||||| | | || | || | || || Sbjct 24844 GGGCGTGAAGTCGTCCTTGGTAAAGTGCGGCAGACTGCGGTGGCGGAAACCAAACGGAAT 24903 Query 302790 ACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAATATT--TAAA 302847 |||||| || || || |||||| || | |||| |||||||||||| || | || Sbjct 24904 ACGCTTACCCTCGACCGACTGCTGGCCGACACACGCCGACATCTGCGAAATGTTGATGAA 24963 Query 302848 TCACTGCCCTTGGAGCCAGCATTTACCAT 302876 | ||||||||||| ||| | ||||| Sbjct 24964 CGA--ACCCTTGGAGCCCGCAATCACCAT 24990 >seq241 Length=127242 Score = 86.0 bits (94), Expect = 2e-11 Identities = 71/87 (82%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 251487 ACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGAGC 251546 |||||| || |||||||| || |||||||| ||||||||||| |||||||| || || | Sbjct 52273 ACCGTGCGAGATCATACAGTCGCGCTCCATCTCACCGAAACGCAGACCACCGTCACGCGA 52332 Query 251547 CCTACCCTCGGCAGGCTGACGAGTGAG 251573 | ||||||| | ||||| || ||||| Sbjct 52333 GCGACCCTCGACGGGCTGGCGCGTGAG 52359 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471812036989415