Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20japonica_20[genbank_20GCA_5F001264785.1_202015-08-11] 295 sequences; 8,341,760 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq21 122 6e-23 seq294 118 7e-22 seq57 111 1e-19 seq218 93.3 3e-14 >seq21 Length=392 Score = 122 bits (134), Expect = 6e-23 Identities = 157/214 (73%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || ||||| | |||||||||||||||||||| |||||||| ||| | || | || Sbjct 84 AGCACAAGGTGGAGCGTGCTCTCCTTCTGAATGTTGTAGTCCGAGAGGGTACGGCCGTCC 143 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| ||||| ||||||||||||| || || ||||| | || | ||||||||||| Sbjct 144 TCCAGCTGCTTGCCGGCGAAGATCAACCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCC 203 Query 34886 TTTATTTTTTGTTTGACGGATG-CTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 | | || || || ||| | |||| || | | |||||| || | || || || Sbjct 204 TGAACCTTCGACTTCAC-AATGTCGATCGTGTCGCTAGACTCGACCTCCAGAGTGATCGT 262 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 ||| || ||||| ||||| | |||||| |||||| Sbjct 263 CTTGCCAGTGAGAGTCTTGATAAAGATTTGCATG 296 >seq294 Length=28318 Score = 118 bits (130), Expect = 7e-22 Identities = 157/216 (73%), Gaps = 4/216 (2%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||||||||| ||| ||||||||| ||||| |||||||| || |||| | || Sbjct 4358 AGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCGTCC 4417 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| |||||||||||||| || || ||||| | || | ||||||||||| Sbjct 4418 TCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCC 4477 Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943 | || || ||||| || || || | || | |||||| || | ||| || | Sbjct 4478 TGGATCTTGGCCTTGAC--ATTCTCGATGGTGTCCGAAGACTCGACCTCGAGGGTAATCG 4535 Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGA 34979 |||| ||||| |||||||| || || | ||||||| Sbjct 4536 TCTTACCCGTAAGGGTCTTGACGAACACTTGCATGA 4571 >seq57 Length=21272 Score = 111 bits (122), Expect = 1e-19 Identities = 156/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| |||||||| | || ||||||||| ||||| ||||| || |||| |||| Sbjct 307 CAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGGCCATC 366 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || || ||||| ||||| |||||||| || || ||||| | || | ||||||||||| Sbjct 367 CTCGAGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTC 426 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 | || || |||||| | |||| || | |||||| || | ||| || || Sbjct 427 CTGGATCTTGGCCTTGACGTTCTCAATCGTGTCCGAAGACTCGACCTCGAGGGTGATTGT 486 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGATAGT 34983 |||||| || |||||||| ||||||| ||||| |||| Sbjct 487 CTTTCCGGTAAGGGTCTTAACAAAGACTTGCATAGTAGT 525 >seq218 Length=82981 Score = 93.3 bits (102), Expect = 3e-14 Identities = 153/217 (71%), Gaps = 8/217 (4%) Strand=Plus/Minus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTC--- 34821 ||| |||||||| | || ||||||||| ||||| ||||| | | || || | Sbjct 234 CAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTC-GCTCC-CTCCGGACCAA 177 Query 34822 -ATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCT 34880 | ||| || ||||| ||||| |||||||| || || ||||| | |||| ||||||| Sbjct 176 CAGCGT--AGCTGCTTGCCGGCAAAGATCAGACGCTGTTGGTCCGGAGGCATACCCTCCT 119 Query 34881 TGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTA 34940 |||| | || || |||||| | |||| || || |||||| || | ||| | Sbjct 118 TGTCCTGGATCTTGGCCTTGACGTTCTCAATCGTGTCCGAGGACTCGACCTCGAGGGTGA 59 Query 34941 TGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | ||||| ||||| || ||||| ||||||| |||||| Sbjct 58 TCGTCTTACCCGTAAGAGTCTTGACAAAGACCTGCAT 22 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325691629032605