Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20japonica_20[genbank_20GCA_5F001264785.1_202015-08-11] 295 sequences; 8,341,760 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq246 134 1e-26 seq262 125 7e-24 seq57 84.2 2e-11 >seq246 Length=57307 Score = 134 bits (148), Expect = 1e-26 Identities = 362/541 (67%), Gaps = 17/541 (3%) Strand=Plus/Plus Query 147456 CACGGCGATAGACGCCAGATTGCAGACGGCCGTCTCTTC-GGCGTCGCTGTACTGCACGA 147514 || ||| || || ||||| ||||| ||||| ||||| || |||| |||||||| | | Sbjct 36146 CAGGGCAATCGAGGCCAGGTTGCACACGGCGGTCTCATCCGGCGA-GCTGTACTCGATAA 36204 Query 147515 TTTCGGCGCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTTCCGAT 147574 | || | ||||||||| | || || || |||| || | ||| ||||| || || | Sbjct 36205 TCTCCGTGCACAGGTTCGACGACTTGATCACACCCACGTTCTTCTGGTTGCTCTTGCGGT 36264 Query 147575 TGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCAACGATAA 147634 || || || ||| |||| || | || || ||||||| |||| |||| || Sbjct 36265 TGGCAGCATCCTTGTAGAGAATAAAGGGGGTACCCGTCTCGATCTGCGCCTCAAGGACCG 36324 Query 147635 ACCTATGC-AGGTCCTGCGCTCGCACCCGCTGCCGATAGCGGCCCTCGTTTTCGTACCGC 147693 | || || | |||||| ||| | || |||||||||| ||||| ||| Sbjct 36325 -CGTACCAGAGCTTCTGCGCCTTGACCGTACGACGGCCGCGGCCCTCGCGCTCGTAGCGC 36383 Query 147694 TCGTACAACCGCTCAAACTCGTCGCCGTAGCAATCGGCAAGGCCGGGACACTGATGCGGA 147753 ||||| | | ||| ||||| ||||||||||| || || ||||| || |||| || Sbjct 36384 TCGTAGAGCTCCTCGAACTCCTCGCCGTAGCAGTCCGCGAGGCCAGGGCACTCGGCAGGG 36443 Query 147754 CACATCAGCGACCACATGTCGTCCGCGTTAACGCGTCGCATAAACAGATCCGGCACCCAC 147813 |||||||||| ||| | || | || || ||| |||||||| || ||||| Sbjct 36444 CACATCAGCGTCCAGTCACCACCCTGCTCGACACGCTTCATGAACAGATCAGGGACCCAT 36503 Query 147814 AGCGCGTACATAAGATCGCGCGCTTTGCAATCCTCGGC--GCCCATGTTGCGTTTC--AA 147869 || ||||| | ||| |||||||| | | |||| | || || | | || | | Sbjct 36504 AGGGCGTAGAAAAGGTCGCGCGC---ACGAACCTCCTCCTTACCGTGGTTC-TTGCGGAG 36559 Query 147870 ATTAA-GCACGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTT 147928 | || | || | | ||| ||| | |||||| || |||| ||| | ||| | |||||| Sbjct 36560 GTCAATGAACTC-AAAGACGTCCGAGTGCCACGGCTCAAGGTAAATGGCAAACGCACCAG 36618 Query 147929 TACGC---TTTCCGCCCTGGTCGACATGGCGCACCATGTTGTTAAACACGCGCACCATGG 147985 ||| || || ||||||||||||| ||| || ||||||| |||| || | ||||| Sbjct 36619 GGCGCTTGTTGCCACCCTGGTCGACATAGCGGGCCGTGTTGTTGTACACACGGAGCATGG 36678 Query 147986 G 147986 | Sbjct 36679 G 36679 >seq262 Length=46027 Score = 125 bits (138), Expect = 7e-24 Identities = 331/496 (67%), Gaps = 37/496 (7%) Strand=Plus/Minus Query 46774 AAAAGGCCCAGTGGGCCATGAAGTGGATCGA-GAGCGAGACCGCCACGCTGGCCGAGCGC 46832 |||||||| ||||||| || |||||| | || || | ||| || | | |||||| Sbjct 5129 AAAAGGCCGAGTGGGCGCTGCGCTGGATCAACGACCGCCGC-GCCTCGTTCTCGGAGCGC 5071 Query 46833 ATGGTGGCATTCGCGATAGTCGAAGGCGTGtttttttCGGGCAGTTTTGCCGCCATTTTT 46892 | ||||| || || ||||| ||| | || || |||||| |||||| | || ||| Sbjct 5070 CTCGTGGCCTTTGCCGCGGTCGAGGGCATCTTCTTCTCGGGCTCCTTTGCCTCGATCTTT 5011 Query 46893 TACATTAAAACCAAAGGCATAATGCCGGGCCTGACGTTCAGTAACGAGTTGATCTCGCGC 46952 | | || | ||| | |||||||| || | ||| |||||| | |||||||| Sbjct 5010 TGGCTGAAGAAGCGCGGCCTGATGCCGGGTCTCGCCTTCTCGAACGAGCTCATCTCGCGT 4951 Query 46953 GACGAAGGACTACACACGGACTTTGCGTGTCT-CTATTA--------CAAGACGCGCGTG 47003 ||||| || || ||||| ||||||||||| || || || ||||| ||||| | Sbjct 4950 GACGAGGGTCTGCACACCGACTTTGCGTGCCTGCTCTTTGGCCACCTCAAGAAGCGCGCG 4891 Query 47004 AATGAGAAATTAAACTCGGACACGATCCTGAGCATGTTTAGG---GAGGCGGTGAGCATC 47060 | | | ||||| | ||| || | | | ||||| || ||| Sbjct 4890 CA------------CCCCGACAC---CGTGAACAAGATCATCACCGAGGCCGTCTCGATC 4846 Query 47061 GAAAAGGAGTTTTTTACTGCGGCGCTGCCCGTCGCCTTGCTGGGCATGAACGCACAGTCT 47120 || | || ||||| || | ||||| || || | | | ||||||||||| | |||| Sbjct 4845 GAGCAAGACTTTTTGACGGATGCGCTCCCGGTGTCGCTCATTGGCATGAACGCCC-GTCT 4787 Query 47121 -ATGTGCGAATATATTGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGACAAC-CGA 47178 |||||| | || ||||||||||| ||||| || ||| | || |||||| |||| ||| Sbjct 4786 GATGTGCCAGTACATTGAGTTTGTTGCGGACCGCCTGCTTGTCGCGCTCGG-CAACTCGA 4728 Query 47179 AATATTTTAATGCTCG--TAATCCGTTTGAGTTTATGAACAACATTTCGCTCGAGGGCAA 47236 | | | || |||| || || || || |||||| | ||||| |||||| ||||||| Sbjct 4727 AGCACTACAA--CTCGACGAACCCCTTCGACTTTATGGAGAACATCTCGCTCCAGGGCAA 4670 Query 47237 AACCAATTTTTTCGAG 47252 | || ||||||||| Sbjct 4669 GTCGAACTTTTTCGAG 4654 >seq57 Length=21272 Score = 84.2 bits (92), Expect = 2e-11 Identities = 96/129 (74%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961 ||| | ||||| |||| || | | ||||| || || |||||||||||||||| || Sbjct 298 ACGGAGGCGCAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGT 357 Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021 || ||| |||||||| || |||| | |||| || |||||||| || ||||| ||||| Sbjct 358 GCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGAGGAATGCC 417 Query 132022 TTCTTTATC 132030 || || || Sbjct 418 CTCCTTGTC 426 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476609442496200