Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20japonica_20[genbank_20GCA_5F001264785.1_202015-08-11] 295 sequences; 8,341,760 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq57 116 4e-21 seq294 105 7e-18 seq218 96.9 4e-15 seq21 91.5 1e-13 >seq57 Length=21272 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| |||| ||| ||||| ||||| || ||||| || ||||||||||||| Sbjct 293 CCACCACGGAGGCGCAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTC 352 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || |||||||| ||||| ||||| |||| ||||| || || || || Sbjct 353 AGCGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGAGGA 412 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || || || || || ||||| || | ||||| || || || || Sbjct 413 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCAATCGTGTCCGAAGACTCGACC 472 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || || || || ||||| | || ||||| || | |||||| Sbjct 473 TCGAGGGTGATTGTCTTTCCGGTAAGGGTCTTAACAAAGACTTGCAT 519 >seq294 Length=28318 Score = 105 bits (116), Expect = 7e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || | ||| ||||| || || || ||||| || ||||||||||| || ||| | Sbjct 4352 AGGCGAAGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGG 4411 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 ||| |||||||| ||||| || || |||| ||||| || || || || ||||| || Sbjct 4412 CCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGAGGAATGCCCTCC 4471 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || || || || ||||| || | ||||| || || || || ||||| ||| Sbjct 4472 TTGTCCTGGATCTTGGCCTTGACATTCTCGATGGTGTCCGAAGACTCGACCTCGAGGGTA 4531 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || ||||| || | || || ||||| | |||||| Sbjct 4532 ATCGTCTTACCCGTAAGGGTCTTGACGAACACTTGCAT 4569 >seq218 Length=82981 Score = 96.9 bits (106), Expect = 4e-15 Identities = 161/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCG--- 134543 || || | ||| |||| ||| ||||| ||||| || ||||| || |||||||||||| Sbjct 248 CCACCACGGAGGCGCAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTC 189 Query 134544 CCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGC 134603 || ||| | || ||| ||||| ||||| ||||| |||| |||||| || || || Sbjct 188 CCTCCGGACCAACAG-CGT--AGCTGCTTGCCGGCAAAGATCAGACGCTGTTGGTCCGGA 132 Query 134604 GGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCC 134663 || || || || || || || || || ||||| || | ||||| || || || Sbjct 131 GGCATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCAATCGTGTCCGAGGACTCG 72 Query 134664 ACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || ||||| || || || ||||| || | ||| || || || | ||||| Sbjct 71 ACCTCGAGGGTGATCGTCTTACCCGTAAGAGTCTTGACAAAGACCTGCAT 22 >seq21 Length=392 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 134504 CACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTC 134563 ||| ||||| |||||| ||||| |||||||||||||| | ||| | ||| || Sbjct 86 CACAAGGTGGAGCGTGCTCTCCTTCTGAATGTTGTAGTCCGAGAGGGTACGGCCGTCCTC 145 Query 134564 GAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTG 134623 ||||| ||||| || || ||||| ||||| || || || || ||||| || || || || Sbjct 146 CAGCTGCTTGCCGGCGAAGATCAACCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTG 205 Query 134624 AATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTT 134683 || || || || ||| | |||||| || || || || ||||| || || || Sbjct 206 AACCTTCGACTTCACAATGTCGATCGTGTCGCTAGACTCGACCTCCAGAGTGATCGTCTT 265 Query 134684 ACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || | ||| || | || |||||||| Sbjct 266 GCCAGTGAGAGTCTTGATAAAGATTTGCAT 295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505396536343400