Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20japonica_20[genbank_20GCA_5F001264785.1_202015-08-11] 295 sequences; 8,341,760 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq246 161 1e-34 seq262 89.7 6e-13 >seq246 Length=57307 Score = 161 bits (178), Expect = 1e-34 Identities = 686/1066 (64%), Gaps = 41/1066 (4%) Strand=Plus/Plus Query 111044 ATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGAC 111103 ||||| | ||||| || || |||||||| | |||||| || | ||| ||||| || || Sbjct 35952 ATAAAGGCGTCCGCCAGGCCCTGAACACCGATACCAATCGGGCGGTGGCGCATGTTGGAA 36011 Query 111104 TTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTA 111163 ||||| |||| ||||| || | || ||||||| | ||||| || || ||| Sbjct 36012 CGGCGCGCGCTCTCGACGGGGTAGTAGTTGATGTCAATAATGCGGTTCAGGTTCTTGCAC 36071 Query 111164 ACAATCTTTGTGATTTCATG----------AAGTTTTTCATAATCAAAAGTGCGAGTCTC 111213 || | ||| | | || || ||||| | | | || | | || ||| | Sbjct 36072 ACCACCTTGGCCGTCTCGTGCAGGCGGGCAAAGTTGTACTTCTTCGAC-GAGCCAGTGCC 36130 Query 111214 TTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTT 111273 ||| | | | | || ||||| || || |||| ||||| || || ||||||||| Sbjct 36131 CTCAATAA---AGGTAGGCAGGGCAATCGAGGCCAGGTTGCACACGGCGGTCTCATCCGG 36187 Query 111274 ATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTT 111333 ||||||| | ||| || || || | ||| || ||| ||| |||| ||||| Sbjct 36188 CGAGCTGTACTCGATAATCTCCGTGCACAGGTTCGACGACTTGATCACACCCACGTTCTT 36247 Query 111334 TTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGT 111393 ||||| ||||| |||| |||||||||||||| || |||| || |||||||| | Sbjct 36248 CTGGTTGCTCTTGCGGTTGGCAGCATCCTTGTAGAGAATAAAGGGGGTACCCGTCTCGAT 36307 Query 111394 CTGTGATTTGAGAATAGCCTTCCA-AACATCGGCGGCTGGTACAATGGCGTTGGCC-CGT 111451 ||| | | || | || | ||| | | || ||| || | || | || |||| || Sbjct 36308 CTGCGCCTCAAGGACCGCGTACCAGAGCTTCTGCGCCTTG-ACCGT-ACGACGGCCGCGG 36365 Query 111452 CCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGA 111511 ||||| |||||| |||||| | || |||||||| || ||| | ||| Sbjct 36366 CCCTCGCGCTCGTAGCGCTCGTAGAGCTCCTCGAACTCCTCGCCGTAGCAGTCCGCGAGG 36425 Query 111512 CCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATG 111571 || || || | | || || | || | ||| | |||||| | ||| || ||||||||| Sbjct 36426 CCAGGGCACTCGGCAGGGCACATCAGCGTCCAGTCACCACCCTGCTCGACACGCTTCATG 36485 Query 111572 AAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCT 111631 || || || || | ||| |||| | || || || | ||| |||| || | ||| Sbjct 36486 AACAGATCAGGGACCCATAGGGCGTAGAAAAGGTCGCGCGCACGAACCTCCTCCTTACCG 36545 Query 111632 TGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACT 111691 ||||| || | |||| |||||| | || |||| |||||| |||||||| || | Sbjct 36546 TGGTTCTTGCGGAGGTCAATGAACTCAAAGACGTCCGAGTGCCACGGCTCAAGGTAAATG 36605 Query 111692 GCGATAGATCC----CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAA 111747 || | | || | | | | ||| | || | |||||||| || ||| ||| | Sbjct 36606 GCAAACGCACCAGGGCGCTTGTTG-CCACCCTGGTCGACATAGCGGGCCGTGTTGTTGTA 36664 Query 111748 TACGCGAAGCATTGGAATAATACCATCTGAT-TGACCATTTGTCCCCCGAA--TACGAGA 111804 || || ||||| ||||| ||||| | || | ||| || || || || ||||| Sbjct 36665 CACACGGAGCATGGGAATGATACCGT-TGCTAACACCGTTCGTGCCGGCAATGTACGA-- 36721 Query 111805 TTTATTGGCTCTCAC--AT-CA-TGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGA 111860 | || | ||| || || ||||||| | || ||||| || ||| ||| | Sbjct 36722 ---ACCGG-TACCACGGATGCAGTGGATGTTGAGACCGATACCACCGGCCGTCTTGCTAA 36777 Query 111861 TTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGA 111920 | ||| ||| | | || || | || || || | || ||||| ||||| || | Sbjct 36778 TCATCGCGCACGACTTGAGCGTGTCGTAAATGCCCTCAATCGAGTCGTCCTTCATGCACA 36837 Query 111921 TAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTG 111980 |||||||| |||||||| || | |||||||| || |||||||| || || | | Sbjct 36838 CCAGGAAGCACGACGACATCTGGGGGTTCGGTGTACCGGCGTTGAAGAGAGTCGGCGAGG 36897 Query 111981 CGTGAATGAA--CATACCTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTC 112038 |||| | || | | | | |||||| ||| ||| ||||| | | ||| ||| Sbjct 36898 CGTGCGTAAAGGCCTTC--TCCGACATCATGTTGTAGGTCTCGATCGCGCTCGCAACGTC 36955 Query 112039 TTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGTACTGTGGG 112084 |||||||| |||| || || ||||||| ||||| ||| ||| Sbjct 36956 GGTGCCGTGGATACCGACAGCAACACGCATGAGCATGTGCTGGGGG 37001 >seq262 Length=46027 Score = 89.7 bits (98), Expect = 6e-13 Identities = 117/162 (72%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 122659 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCT 122718 ||||| || ||| |||||||| || || || || || || || |||||| ||||| Sbjct 4925 GCAAAGTCGGTGTGCAGACCCTCGTCACGCGAGATGAGCTCGTTCGAGAAGGCGAGACCC 4984 Query 122719 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATA 122778 ||||| || || |||||||||| |||| | || | | || || || ||||||||||| Sbjct 4985 GGCATCAGGCCGCGCTTCTTCAGCCAAAAGATCGAGGCAAAGGAGCCCGAGAAGAAGATG 5044 Query 122779 CCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAG 122820 ||||| || ||||| || | ||||| || | ||| ||| Sbjct 5045 CCCTCGACCGCGGCAAAGGCCACGAGGCGCTCCGAGAACGAG 5086 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628029684132000