Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20japonica_20[genbank_20GCA_5F001264785.1_202015-08-11] 295 sequences; 8,341,760 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq246 136 5e-27 seq262 118 1e-21 seq41 91.5 2e-13 >seq246 Length=57307 Score = 136 bits (150), Expect = 5e-27 Identities = 677/1056 (64%), Gaps = 39/1056 (4%) Strand=Plus/Minus Query 104221 CCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGT 104280 ||| ||| ||||| ||||||| || || ||||||| || || ||| ||| | Sbjct 37001 CCCCCAGCACATGCTCATGCGTGTTGCTGTCGGTATCCACGGCACCGACGTTGCGAGCGC 36942 Query 104281 CTTGGAGACATACGACAAGATGTCCCAAGGTATG--TTCATTCACGCAACACCAACCCTC 104338 | ||||| ||| ||| |||||| | | | | || | ||||| | || || ||| Sbjct 36941 GATCGAGACCTACAACATGATGTCGGA--GAAGGCCTTTACGCACGCCTCGCCGACTCTC 36884 Query 104339 TTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAG 104398 ||||| || |||||||| | ||||| ||||| |||||||| | || ||||| Sbjct 36883 TTCAACGCCGGTACACCGAACCCCCAGATGTCGTCGTGCTTCCTGGTGTGCATGAAGGAC 36824 Query 104399 GACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCT 104458 ||||| || | || || || | || || | | ||| ||| || ||| ||| Sbjct 36823 GACTCGATTGAGGGCATTTACGACACGCTCAAGTCGTGCGCGATGATTAGCAAGACGGCC 36764 Query 104459 GGGGGTATTGGGATGCACATCCA-TG-AT--GTGAGAGCCAATAAATCTCGTA--TTCGG 104512 || ||||| || | ||||||| || || ||| | || | ||||| || Sbjct 36763 GGTGGTATCGGTCTCAACATCCACTGCATCCGTGGTA-CCGGT-----TCGTACATTGCC 36710 Query 104513 GGGACAAATGGTCA-ATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGC 104571 || || || ||| | || | ||||| ||||| ||||| || || | ||| ||| || Sbjct 36709 GGCACGAACGGTGTTAGCA-ACGGTATCATTCCCATGCTCCGTGTGTACAACAACACGGC 36651 Query 104572 GCGCTATGTAAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGC 104627 |||||||| | || | ||| | | | | || | | || | || ||||||| Sbjct 36650 CCGCTATGTCGACCAGGGTGG-CAACAAGCGCCCTGGTGCGTTTGCCATTTACCTTGAGC 36592 Query 104628 CATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGG 104687 | |||||| |||| || | |||||| |||| | || ||||| ||| | ||||||| Sbjct 36591 CGTGGCACTCGGACGTCTTTGAGTTCATTGACCTCCGCAAGAACCACGGTAAGGAGGAGG 36532 Query 104688 CGCGGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTT 104746 || ||| ||||| || |||| ||| || ||| | || ||||| ||||||||| | || Sbjct 36531 TTCG-TGCGCGCGACCTTTTCTACGCCCTATGGGTCCCTGATCTGTTCATGAAGCGTGTC 36473 Query 104747 GAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCC 104806 ||| || |||| | ||| | || | || || | | || ||||| ||| | || | Sbjct 36472 GAGCAGGGTGGTGACTGGACGCTGATGTGCCCTGCCGAGTGCCCTGGCCTCGCGGACTGC 36413 Query 104807 GTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCG 104866 || |||||||| || | || ||| |||||| || || || | | | || Sbjct 36412 TACGGCGAGGAGTTCGAGGAGCTCTACGAGCGCTACGAGCGCGAGGGCCGCG-GCCGTCG 36354 Query 104867 -ACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTA 104924 ||||| | || || || | | ||| | || | || || | || | |||||| |||| Sbjct 36353 TACGGT-CAAGGCGCAGAAGCTCTGGTACGCGGTCCTTGAGGCGCAGATCGAGACGGGTA 36295 Query 104925 CACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTG 104984 | || | || || ||||| || || |||| ||||| || || ||||| |||||| Sbjct 36294 CCCCCTTTATTCTCTACAAGGATGCTGCCAACCGCAAGAGCAACCAGAAGAACGTGGGTG 36235 Query 104985 TGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAG--ACAAAGATGAGAC 105042 |||||||| || || || || || || || | || ||||| |||||||| Sbjct 36234 TGATCAAGTCGTCGAACCTGTGCACGGAGATTATCGA--GTACAGCTCGCCGGATGAGAC 36177 Query 105043 GGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGA------TCCAGAGAC 105096 || ||||| ||||| || || || || || || | | | | || | | | Sbjct 36176 CGCCGTGTGCAACCTGGCCTCGATTGCCCTGCCTACCTTTATTGAGGGCACTGGCTCGTC 36117 Query 105097 AAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAA 105156 |||| | | | || || ||||| | || || ||| ||||| || Sbjct 36116 GAAGAAGTACAACTTTGCCCGCCTGCACGAGACGGCCAAGGTGGTGTGCAAGAACCTGAA 36057 Query 105157 CAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACA 105216 | | ||||||| | || | |||||||| |||| || || || || ||| | || Sbjct 36056 CCGCATTATTGACATCAACTACTACCCCGTCGAGAGCGCGCGCCGTTCCAACATGCGCCA 35997 Query 105217 CCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGA 105252 ||| || |||||| ||||||||||||| || ||||| Sbjct 35996 CCGCCCGATTGGTATCGGTGTTCAGGGCCTGGCGGA 35961 >seq262 Length=46027 Score = 118 bits (130), Expect = 1e-21 Identities = 118/153 (77%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 94804 GAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCT 94863 ||||| ||| | || ||||| || ||||| ||||||||||| || ||||| | | Sbjct 5076 GAGCGCCTCGTGGCCTTTGCCGCGGTCGAGGGCATCTTCTTCTCGGGCTCCTTTGCCTCG 5017 Query 94864 ATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATC 94923 || | |||||| |||||||| || || ||||| |||||| |||||| |||||||| ||| Sbjct 5016 ATCTTTTGGCTGAAGAAGCGCGGCCTGATGCCGGGTCTCGCCTTCTCGAACGAGCTCATC 4957 Query 94924 TCTCGTGACGAGGGACTCCACCAAGAGTTTGCG 94956 || ||||||||||| || ||| || |||||| Sbjct 4956 TCGCGTGACGAGGGTCTGCACACCGACTTTGCG 4924 >seq41 Length=25600 Score = 91.5 bits (100), Expect = 2e-13 Identities = 202/299 (68%), Gaps = 12/299 (4%) Strand=Plus/Plus Query 169160 TTGAGAATGAGACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGA 169219 |||| ||| || ||||||||||| || ||||| || || ||||||||||| || Sbjct 17654 TTGATAATCAGGCCCTTGATGTGCGAGCCGTCAAAGTCCTGGTCGGTCATGATCATCAG- 17712 Query 169220 CGA-CCATACCGAAGCTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGAT 169278 ||| || ||||| | || || | || | ||| || || || ||||| | ||| Sbjct 17713 CGAGCCGTACCGCAATCCGTTGACCGAGTCGTACTGCTTGCCGTGCTGGAGACCAAGGAT 17772 Query 169279 CTTCTTGAGATCGTTGAACTCTTGGTT-----TGATGTGAGCTGTGTGACAGAGGCATCG 169333 || |||| | |||| ||| ||| | || | | ||| | | || ||| Sbjct 17773 CTCTTTGATGTTCTTGATCTCGGCGTTCTTCCTAATC-GCGTCGTGCGTC----GCCTCG 17827 Query 169334 CGAACATTCTTACACTTCCCACGAAGAGGGAAGACACCGTAGTGATCACGACCAACGACG 169393 || |||||| ||| ||||| || ||||| |||||||| ||| || || || || Sbjct 17828 CGCACATTCAGCAGCTTACCACGCAGCGGGAACACACCGTACGCATCGCGGCCGACCTCG 17887 Query 169394 GAGAGACCCGCGACTGCGAGAGTCTTCGCCGAGTCACCCTCGGTGACGATGAGCGTACA 169452 || |||| ||||||||| | ||| ||||||||||| || |||| ||||||||| || Sbjct 17888 CTCAGGCCCGAGACTGCGAGCGCCTTGGCCGAGTCACCTTCCGTGAGGATGAGCGTGCA 17946 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583258649225800