Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20japonica_20[genbank_20GCA_5F001264785.1_202015-08-11] 295 sequences; 8,341,760 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq282 105 5e-18 >seq282 Length=35430 Score = 105 bits (116), Expect = 5e-18 Identities = 414/655 (63%), Gaps = 37/655 (6%) Strand=Plus/Plus Query 29837 GTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTTATCCAGG 29896 ||||| || | | |||||| | ||||||||| |||||| || | |||| || ||| Sbjct 33555 GTGGGGAACGCGCGGGGCTCGCGCTCGAGCTGCTCCTTCAGGGGCCCGACGTGGTCGAGG 33614 Query 29897 TAGACGTGAGCGTCTCCCAGGTTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGA 29956 |||||||| ||||| |||| | | ||||| | | || || |||||||| Sbjct 33615 TAGACGTGTGCGTCGCCCATCGCGAGCGTGAACTCGGCGGCCTCGCATCCCGTGACGTGC 33674 Query 29957 GCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATG 30016 || || | || ||| || || | |||||| || ||||| ||||| || ||||| || | Sbjct 33675 GCAATGAGGTGCGTCAGTAGCGCGTAGCTAGCAATGTTGAAGGGCACGCCGAGGCCGAGA 33734 Query 30017 TCCCCCGACCTCTGGTAGAGCTGACACGAGAGCT---------------CTCCG---TCG 30058 || | ||| | |||||| | ||| |||||||||| || || ||| Sbjct 33735 TCGCACGAGCGCTGGTACATCTGGCACGAGAGCTGCGGCTTGCGCCCAGCTGCGGCCTCG 33794 Query 30059 CTC---------------ACGTAAAACTGACACATGGCGTGGCACGGAGGAAGAGCCATG 30103 | || | ||||| |||| | |||||||| || || ||||| Sbjct 33795 TCCGGCGTAGGCAGTGCGACAAAGAACTGGCACAGGATATGGCACGGCGGGAGGGCCATC 33854 Query 30104 AGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTC 30163 || || |||| |||||||| |||| | | ||||| | ||| ||||| || Sbjct 33855 AGCGGCAGGTCTGGCGGGTTCCACGCGCTGAGCAGAATGCGGCGGTCGGTGGGGTTCGTC 33914 Query 30164 CTGATGAGGTCCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTC--TGCCC 30221 |||| ||| | | | | ||||| || || || | || |||||| || || Sbjct 33915 TTGATCTGGTGGATGACCTGCGCGAGCTGGTCGACGCCTTTGCCGCTGTAGTCCGTGTCC 33974 Query 30222 TCATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGT 30281 | ||| ||||| || || || || | ||||||||| ||||| || || ||||||| Sbjct 33975 GC--GTCGACGTACTGCGCGCCAAAGTGACGCCACTGGAAGCCGTAGACGGGGCCCAGGT 34032 Query 30282 CTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGT 30341 | ||||| | ||| | | || | ||| | | || || || |||||| ||| Sbjct 34033 CGCCCTCGCGGCGGTGGCCCAGACCGCGCTTCTTGAGGAACTCGGCAGAGCCGTTGCCGT 34092 Query 30342 CCCAGATCTTTACCCCCTTCTCAGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACC 30401 ||||||| | || ||| | |||| |||| || || || | ||||| Sbjct 34093 CCCAGATGTGCACGTTGCGCTCCGCGAGCAGGTTGGCGTCCGTCTTGCCGGAAATGAACC 34152 Query 30402 ACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30456 | ||||||||||| | ||| | ||||||| | ||||||||| || || || Sbjct 34153 AGAGCAGCTCCTCGAGCACGCCGCGGAAAAAGACACGCTTGGTCGTAAGCAGCGG 34207 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406308939187140