Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20japonica_20[genbank_20GCA_5F001264785.1_202015-08-11] 295 sequences; 8,341,760 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq294 185 2e-41 seq57 161 2e-34 seq21 150 4e-31 seq218 145 2e-29 seq276 118 2e-21 >seq294 Length=28318 Score = 185 bits (204), Expect = 2e-41 Identities = 168/212 (79%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || |||||||| || ||||| || |||||||| || |||| ||| || | || || Sbjct 4358 AGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCGTCC 4417 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| ||||| |||||||| ||||||| || ||||||||| Sbjct 4418 TCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCC 4477 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || || || ||||||||||| || || |||||||| || |||||| Sbjct 4478 TGGATCTTGGCCTTGACATTCTCGATGGTGTCCGAAGACTCGACCTCGAGGGTAATCGTC 4537 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| || ||||| || ||||| ||||| Sbjct 4538 TTACCCGTAAGGGTCTTGACGAACACTTGCAT 4569 >seq57 Length=21272 Score = 161 bits (178), Expect = 2e-34 Identities = 163/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| || || ||||| || |||||||| || || || || | ||||| Sbjct 308 AGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGGCCATCC 367 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| || ||||| ||||| |||||||| ||||||| || ||||||||| Sbjct 368 TCGAGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCC 427 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| || || ||||| || || |||||||| ||||| ||| Sbjct 428 TGGATCTTGGCCTTGACGTTCTCAATCGTGTCCGAAGACTCGACCTCGAGGGTGATTGTC 487 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || || ||||| ||||| || ||||| Sbjct 488 TTTCCGGTAAGGGTCTTAACAAAGACTTGCAT 519 >seq21 Length=392 Score = 150 bits (166), Expect = 4e-31 Identities = 163/215 (76%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || |||||||| || ||| ||| || || ||||| || |||| ||||| | || || Sbjct 84 AGCACAAGGTGGAGCGTGCTCTCCTTCTGAATGTTGTAGTCCGAGAGGGTACGGCCGTCC 143 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| |||||||| | || |||||||| ||||||| || ||||||||| Sbjct 144 TCCAGCTGCTTGCCGGCGAAGATCAACCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCC 203 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTC---AGAGCTTTCAACCTCGAGAGTGATC 211079 || | ||| ||||| | ||||| ||||| ||| || ||||| ||||||||| Sbjct 204 TGAACCTTCGACTTCACAATGTCGATCGTGTCGCTAGA---CTCGACCTCCAGAGTGATC 260 Query 211080 GTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || ||||||||||| | ||| | ||||| Sbjct 261 GTCTTGCCAGTGAGAGTCTTGATAAAGATTTGCAT 295 >seq218 Length=82981 Score = 145 bits (160), Expect = 2e-29 Identities = 163/215 (76%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATC---CGCAAGGGTCCTTCCA 210959 || || ||||| || || ||||| || |||||||| || || | | || || | | Sbjct 233 AGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCCCTCCGGACCAAC-A 175 Query 210960 TCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTG 211019 | | ||||||||||| || ||||| || || |||||||| ||||| | || |||||| Sbjct 174 GCGT--AGCTGCTTGCCGGCAAAGATCAGACGCTGTTGGTCCGGAGGCATACCCTCCTTG 117 Query 211020 TCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATC 211079 ||||||||||| || ||||| || || ||||| ||| || |||||||| |||||| Sbjct 116 TCCTGGATCTTGGCCTTGACGTTCTCAATCGTGTCCGAGGACTCGACCTCGAGGGTGATC 57 Query 211080 GTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| ||||| |||||||| ||||| |||||||| Sbjct 56 GTCTTACCCGTAAGAGTCTTGACAAAGACCTGCAT 22 >seq276 Length=39448 Score = 118 bits (130), Expect = 2e-21 Identities = 103/128 (80%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| || || ||||| || ||||| ||||| || || |||| || ||| Sbjct 4992 AGGACGAGGTGCAGGGTCGACTCCTTCTGGATATTATAGTCGCTGAGCGTCCGCCCGTCT 5051 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| || ||||| ||||| |||||||| ||||||| || ||||||||| Sbjct 5052 TCGAGCTGCTTGCCCGCAAAGATCAGGCGCTGTTGGTCCGGAGGAATACCCTCCTTGTCC 5111 Query 211023 TGGATCTT 211030 |||||||| Sbjct 5112 TGGATCTT 5119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159147618767675