Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20japonica_20[genbank_20GCA_5F001264785.1_202015-08-11] 295 sequences; 8,341,760 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq294 134 3e-26 seq21 107 5e-18 seq218 100 7e-16 >seq294 Length=28318 Score = 134 bits (148), Expect = 3e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || ||||| || || || || || |||| ||||| || | | ||| | || || Sbjct 4358 AGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCGTCC 4417 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || |||||||| || || |||||||| || ||||| || |||||||| Sbjct 4418 TCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCC 4477 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| ||| ||||||||||| || | || || || | || |||||| Sbjct 4478 TGGATCTTGGCCTTGACATTCTCGATGGTGTCCGAAGACTCGACCTCGAGGGTAATCGTC 4537 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || ||||| | || || | |||||||||||| Sbjct 4538 TTACCCGTAAGGGTCTTGACGAACACTTGCAT 4569 >seq21 Length=392 Score = 107 bits (118), Expect = 5e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || ||||||||||| ||| || || || | ||||| || | | || | || || Sbjct 84 AGCACAAGGTGGAGCGTGCTCTCCTTCTGAATGTTGTAGTCCGAGAGGGTACGGCCGTCC 143 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || |||||||| | || |||||||| || ||||| || |||||||| Sbjct 144 TCCAGCTGCTTGCCGGCGAAGATCAACCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCC 203 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || | ||| ||||||| ||||| ||||| | || || || | ||||||||| Sbjct 204 TGAACCTTCGACTTCACAATGTCGATCGTGTCGCTAGACTCGACCTCCAGAGTGATCGTC 263 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || | ||| || || || | |||||| Sbjct 264 TTGCCAGTGAGAGTCTTGATAAAGATTTGCAT 295 >seq218 Length=82981 Score = 100 bits (110), Expect = 7e-16 Identities = 112/150 (75%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 225564 TAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTG 225623 ||||||||| || || ||||| || || |||||||| || || ||||| |||||||| || Sbjct 171 TAGCTGCTTGCCGGCAAAGATCAGACGCTGTTGGTCCGGAGGCATACCCTCCTTGTCCTG 112 Query 225624 GATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTT 225683 |||||| ||| || || || ||||| |||| || || || | ||||||||||| Sbjct 111 GATCTTGGCCTTGACGTTCTCAATCGTGTCCGAGGACTCGACCTCGAGGGTGATCGTCTT 52 Query 225684 GCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| | ||| || | || || ||||| Sbjct 51 ACCCGTAAGAGTCTTGACAAAGACCTGCAT 22 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192526692604730