Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20japonica_20[genbank_20GCA_5F001264785.1_202015-08-11] 295 sequences; 8,341,760 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq294 196 1e-44 seq57 187 5e-42 seq218 167 5e-36 seq21 145 2e-29 seq276 95.1 3e-14 >seq294 Length=28318 Score = 196 bits (216), Expect = 1e-44 Identities = 180/228 (79%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||||||||||||||| ||||| || | || || || |||||||||||||| | Sbjct 4342 ACCACCACGCAGGCGAAGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGA 4401 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| |||||||| ||||| || || || ||||| ||||||| || |||||||| || Sbjct 4402 AAGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGAGG 4461 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| ||||||||||| |||||||| || || || | ||||| |||||||||| ||||| Sbjct 4462 AATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCGATGGTGTCCGAAGACTCGAC 4521 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| || |||||||||||||| | ||||| ||||| | ||||| Sbjct 4522 CTCGAGGGTAATCGTCTTACCCGTAAGGGTCTTGACGAACACTTGCAT 4569 >seq57 Length=21272 Score = 187 bits (206), Expect = 5e-42 Identities = 178/228 (78%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| ||||| || ||||| || | ||| || || |||||||||||||| Sbjct 292 ACCACCACGGAGGCGCAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCT 351 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||||||||||||||||| || || || ||||||||||||| || |||||||| || Sbjct 352 CAGCGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGAGG 411 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| ||||||||||| |||||||| || || ||| | || || |||||||||| ||||| Sbjct 412 AATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCAATCGTGTCCGAAGACTCGAC 471 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||| ||||| || || | |||||||| || | ||||| Sbjct 472 CTCGAGGGTGATTGTCTTTCCGGTAAGGGTCTTAACAAAGACTTGCAT 519 Score = 87.8 bits (96), Expect = 4e-12 Identities = 78/98 (80%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 282888 AGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCC 282947 || ||||| || | ||| || || |||||||||||||||| || || ||||||||| Sbjct 1 AGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTACGGCCATCC 60 Query 282948 TCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTC 282985 || || ||||| ||||||||||||| || |||||||| Sbjct 61 TCGAGCTGTTTGCCGGCAAAGATCAGGCGCTGTTGGTC 98 >seq218 Length=82981 Score = 167 bits (184), Expect = 5e-36 Identities = 178/230 (77%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| ||||| || ||||| || | ||| || || |||||||||||||| || Sbjct 249 ACCACCACGGAGGCGCAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTC-GC 191 Query 282932 AAGCGTGCGG-CCATCCTC-TAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCC 282989 | | ||| ||| | | ||| || || ||||||||||||| ||| |||||||| Sbjct 190 TCCC-TCCGGACCAACAGCGTAGCTGCTTGCCGGCAAAGATCAGACGCTGTTGGTCCGGA 132 Query 282990 GGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCG 283049 || |||||||||||||| |||||||| || || ||| | || || |||||||| | ||| Sbjct 131 GGCATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCAATCGTGTCCGAGGACTCG 72 Query 283050 ACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || ||||| ||||||||||||||||| | |||||| || || | |||||| Sbjct 71 ACCTCGAGGGTGATCGTCTTACCCGTAAGAGTCTTGACAAAGACCTGCAT 22 >seq21 Length=392 Score = 145 bits (160), Expect = 2e-29 Identities = 161/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 282885 CGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCA 282944 ||||| || || || | |||||| || || || ||||||||||| | || || ||||| Sbjct 81 CGAAGCACAAGGTGGAGCGTGCTCTCCTTCTGAATGTTGTAGTCCGAGAGGGTACGGCCG 140 Query 282945 TCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTG 283004 ||||| || || || ||||| |||||||| || |||||||| ||||| ||||||||| Sbjct 141 TCCTCCAGCTGCTTGCCGGCGAAGATCAACCGCTGTTGGTCCGGAGGAATGCCCTCCTTG 200 Query 283005 TCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATC 283064 || || | ||| | || || | ||||| ||||| || ||||| || ||||||||| Sbjct 201 TCCTGAACCTTCGACTTCACAATGTCGATCGTGTCGCTAGACTCGACCTCCAGAGTGATC 260 Query 283065 GTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| || || | |||||| | || || ||||| Sbjct 261 GTCTTGCCAGTGAGAGTCTTGATAAAGATTTGCAT 295 >seq276 Length=39448 Score = 95.1 bits (104), Expect = 3e-14 Identities = 114/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || ||||||||||| || || || || | || || || ||||| || ||||| Sbjct 4977 CCGCCACGCAGGCGGAGGACGAGGTGCAGGGTCGACTCCTTCTGGATATTATAGTCGCTG 5036 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 ||||| || || || || || || || || |||||||||| || |||||||| ||| Sbjct 5037 AGCGTCCGCCCGTCTTCGAGCTGCTTGCCCGCAAAGATCAGGCGCTGTTGGTCCGGAGGA 5096 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 |||||||||||||| |||||||| || || || || Sbjct 5097 ATACCCTCCTTGTCCTGGATCTTGGCCTTGACTGT 5131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046735243652930