Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20japonica_20[genbank_20GCA_5F001264785.1_202015-08-11] 295 sequences; 8,341,760 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq294 147 5e-30 seq57 138 3e-27 seq218 118 3e-21 seq21 95.1 3e-14 seq276 91.5 4e-13 >seq294 Length=28318 Score = 147 bits (162), Expect = 5e-30 Identities = 156/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||| | ||||| || || || || || || ||||| ||||||||||| || || ||| Sbjct 4566 CAAGTGTTCGTCAAGACCCTTACGGGTAAGACGATTACCCTCGAGGTCGAGTCTTCGGAC 4507 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||||||||| ||||| ||||| |||||||| || || || ||||||||||| || Sbjct 4506 ACCATCGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAACAG 4447 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || |||||||| || || | |||||| | || || ||| || Sbjct 4446 CGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACTCTTTCGGACTACAACATC 4387 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || || || Sbjct 4386 CAGAAGGAGTCGACCCTTCACCTGGT 4361 >seq57 Length=21272 Score = 138 bits (152), Expect = 3e-27 Identities = 154/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||| | || || || || || || ||||| || |||||||||||||| || || ||| Sbjct 516 CAAGTCTTTGTTAAGACCCTTACCGGAAAGACAATCACCCTCGAGGTCGAGTCTTCGGAC 457 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || ||||||||||| ||||| |||||||| || || || ||||||||||| || Sbjct 456 ACGATTGAGAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAACAG 397 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| ||||| || |||||||| ||||| | || || ||| || ||| || Sbjct 396 CGCCTGATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACGCTGAGCGACTACAACATC 337 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || ||||| || || Sbjct 336 CAGAAGGAGTCGACGCTGCACCTGGT 311 >seq218 Length=82981 Score = 118 bits (130), Expect = 3e-21 Identities = 110/140 (79%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATC 177989 || || || ||||| || || || ||||||||||||||||| || ||| ||||| || Sbjct 31 TTTGTCAAGACTCTTACGGGTAAGACGATCACCCTCGAGGTCGAGTCCTCGGACACGATT 90 Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049 ||||||||||| ||||| |||||||| || || || ||||||||||| || || || Sbjct 91 GAGAACGTCAAGGCCAAGATCCAGGACAAGGAGGGTATGCCTCCGGACCAACAGCGTCTG 150 Query 178050 ATCTTCGCCGGAAAACAGCT 178069 ||||| ||||| || ||||| Sbjct 151 ATCTTTGCCGGCAAGCAGCT 170 >seq21 Length=392 Score = 95.1 bits (104), Expect = 3e-14 Identities = 147/209 (70%), Gaps = 6/209 (3%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCA 177980 ||||| || | || |||||||| || || |||||||| || ||||| || ||| Sbjct 292 CAAATCTTTATCAAGACTCTCACTGGCAAGACGATCACTCTGGAGGTCGAGTCTAGC--- 236 Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040 ||||| ||||| | || || ||| |||||||||| || || || ||||||||||| Sbjct 235 GACACGATCGACATTGTGAAGTCGAAGGTTCAGGACAAGGAGGGCATTCCTCCGGACCAA 176 Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100 || || | ||||||||||| || ||||| || || || | || || | || || ||| Sbjct 175 CAGCGGTTGATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGTACCCTCTCGGACTACAAC 116 Query 178101 GTCCAAAAAGAATCAACACTGCATCTTGT 178129 | || || || || || || ||||| Sbjct 115 ATTCAGAAGGAGAGCACGCTCCACCTTGT 87 >seq276 Length=39448 Score = 91.5 bits (100), Expect = 4e-13 Identities = 95/125 (76%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 178005 AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAA 178064 ||||| |||||||| || || || ||||||||||| || || || ||||| || || || Sbjct 5119 AAGATCCAGGACAAGGAGGGTATTCCTCCGGACCAACAGCGCCTGATCTTTGCGGGCAAG 5060 Query 178065 CAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCAT 178124 ||||||||||| || |||| || ||| ||||| |||| || || || || ||||| Sbjct 5059 CAGCTCGAAGACGGGCGGACGCTCAGCGACTATAATATCCAGAAGGAGTCGACCCTGCAC 5000 Query 178125 CTTGT 178129 || || Sbjct 4999 CTCGT 4995 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203726650272230