Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20japonica_20[genbank_20GCA_5F001264785.1_202015-08-11] 295 sequences; 8,341,760 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq21 167 2e-36 seq294 154 1e-32 seq57 131 2e-25 seq276 122 8e-23 seq218 95.1 1e-14 >seq21 Length=392 Score = 167 bits (184), Expect = 2e-36 Identities = 168/213 (79%), Gaps = 4/213 (2%) Strand=Plus/Plus Query 41653 CACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTC 41712 ||| || || ||||||||||||||||||||||| ||||| |||||||| || |||| || Sbjct 86 CACAAGGTGGAGCGTGCTCTCCTTCTGAATGTTGTAGTCCGAGAGGGTACGGCCGTCCTC 145 Query 41713 GAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCAT 41772 ||||||||||||||||| |||| ||||||||||||| |||| || |||||||||| | Sbjct 146 CAGCTGCTTGCCGGCGAAGATCAACCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCC-T 204 Query 41773 GATTTTTTG-CTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTT 41830 || || | |||| || | | | | |||||||| ||||| ||||||| || ||||| Sbjct 205 GAACCTTCGACTTC-ACAATGTCGATCGTGTCGCTAGACTCGACCTCCAGAGTGATCGTC 263 Query 41831 TTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || || || || ||||| | || || |||||| Sbjct 264 TTGCCAGTGAGAGTCTTGATAAAGATTTGCATG 296 >seq294 Length=28318 Score = 154 bits (170), Expect = 1e-32 Identities = 171/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | |||||| || || || ||||||||| ||||| ||||| || Sbjct 4343 CCACCACGCAGGCGAAGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAA 4402 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| |||| |||||||||||||||||||| ||||||||||||||||||| ||| Sbjct 4403 AGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGAGGA 4462 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACC 41815 | || |||||||||| ||| || ||| | | | ||||| ||||| ||| Sbjct 4463 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCGATGGTGTCCGAAGACTCGACC 4522 Query 41816 TCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || | || ||||| |||||||| || ||||| ||||| | |||||| Sbjct 4523 TCGAGGGTAATCGTCTTACCCGTAAGGGTCTTGACGAACACTTGCATG 4570 >seq57 Length=21272 Score = 131 bits (144), Expect = 2e-25 Identities = 169/231 (73%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | |||||| |||||||| ||||||||| ||||| |||||| Sbjct 293 CCACCACGGAGGCGCAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTC 352 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || ||||||||||||||||| || ||||||||||||||||||| ||| Sbjct 353 AGCGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGAGGA 412 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACG-ACACA---GTGTCGCTCGACTC 41811 | || |||||||||| ||| || ||| |||| | || ||||| ||||| Sbjct 413 ATGCCCTCCTTGTCCTGGATCTTGGCCTT----GACGTTCTCAATCGTGTCCGAAGACTC 468 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| | || || || || || || || ||||| || || | ||||| Sbjct 469 GACCTCGAGGGTGATTGTCTTTCCGGTAAGGGTCTTAACAAAGACTTGCAT 519 Score = 111 bits (122), Expect = 1e-19 Identities = 87/104 (84%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 41653 CACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTC 41712 |||||| |||||||| ||||||||| ||||| ||||| |||||||| || | || || Sbjct 3 CACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTACGGCCATCCTC 62 Query 41713 GAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAA 41756 |||||| |||||||| || ||||||||||||||||||| |||| Sbjct 63 GAGCTGTTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGAGGAA 106 >seq276 Length=39448 Score = 122 bits (134), Expect = 8e-23 Identities = 114/145 (79%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 41634 CGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGG 41693 ||||||| || || || | || || ||||| || ||||||||| || ||||||||| Sbjct 4975 CGCCGCCACGCAGGCGGAGGACGAGGTGCAGGGTCGACTCCTTCTGGATATTATAGTCGC 5034 Query 41694 AGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGG 41753 ||| || ||| |||| |||||||||||||| || || ||||||||||||||||||| | Sbjct 5035 TGAGCGTCCGCCCGTCTTCGAGCTGCTTGCCCGCAAAGATCAGGCGCTGTTGGTCCGGAG 5094 Query 41754 GAACGCTCTCCTTGTCCATGATTTT 41778 ||| | |||||||||| ||| || Sbjct 5095 GAATACCCTCCTTGTCCTGGATCTT 5119 >seq218 Length=82981 Score = 95.1 bits (104), Expect = 1e-14 Identities = 163/232 (70%), Gaps = 10/232 (4%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | |||||| |||||||| ||||||||| ||||| |||||| Sbjct 248 CCACCACGGAGGCGCAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTC 189 Query 41696 AGGGTGCGCTCGTCGTCG-AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 | | | | || |||||||||||||| || ||||| ||||||||||||| || Sbjct 188 CCTCCGGAC-CAACAGCGTAGCTGCTTGCCGGCAAAGATCAGACGCTGTTGGTCCGGAGG 130 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACG-ACACA---GTGTCGCTCGACT 41810 | | |||||||||| ||| || ||| |||| | || ||||| |||| Sbjct 129 CATACCCTCCTTGTCCTGGATCTTGGCCTT----GACGTTCTCAATCGTGTCCGAGGACT 74 Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | ||||| | || ||||| |||||||| || ||||| || || | |||||| Sbjct 73 CGACCTCGAGGGTGATCGTCTTACCCGTAAGAGTCTTGACAAAGACCTGCAT 22 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462302295254000