Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20japonica_20[genbank_20GCA_5F001600795.1_202016-03-01] 16 sequences; 8,364,631 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq2 149 5e-31 seq3 129 5e-25 seq7 122 7e-23 >seq2 Length=1413755 Score = 149 bits (164), Expect = 5e-31 Identities = 156/205 (76%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| ||||||||||||||||||||||||||||| || || |||| ||||| || Sbjct 127547 GTGGAGCGTGCTCTCCTTCTGAATGTTGTAGTCCGAGAGGGTACGGCCGTCCTCCAGCTG 127488 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || |||||||| ||||||||||||||||| ||||| | |||||||||||| || || Sbjct 127487 CTTGCCGGCGAAGATCAACCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGAACCTT 127428 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | |||| | | ||| ||||||| || ||||||||||| || Sbjct 127427 CGACTTCACAATGTCGATCGTGTCGCTAGACTCGACCTCCAGAGTGATCGTCTTGCCAGT 127368 Query 45313 CAGAGTCTTCACAAAGATTTGCATG 45337 |||||||| | ||||||||||||| Sbjct 127367 GAGAGTCTTGATAAAGATTTGCATG 127343 >seq3 Length=1023756 Score = 129 bits (142), Expect = 5e-25 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| ||||||||| ||||||||| |||||||||||| |||| ||| | || || Sbjct 656109 ACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGGCCATCCTCG 656050 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || ||||| || |||| ||||||||||| ||||| | ||||||||||||| Sbjct 656049 AGCTGCTTGCCGGCAAAGATCAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGG 655990 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | ||||| | ||| ||||| | ||| || ||||| Sbjct 655989 ATCTTGGCCTTGACGTTCTCAATCGTGTCCGAAGACTCGACCTCGAGGGTGATTGTCTTT 655930 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || || ||||| ||||||| |||||| Sbjct 655929 CCGGTAAGGGTCTTAACAAAGACTTGCAT 655901 Score = 129 bits (142), Expect = 5e-25 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| ||||||||| ||||||||| |||||||||||| |||| ||| | || || Sbjct 657170 ACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGGCCATCCTCG 657111 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || ||||| || |||| ||||||||||| ||||| | |||||||||||| Sbjct 657110 AGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGG 657051 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | ||||| ||| ||||| | ||| |||||||| Sbjct 657050 ATCTTGGCCTTGACGTTCTCAATCGTGTCCGAGGACTCGACCTCGAGGGTGATCGTCTTA 656991 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 ||||| |||||||| ||||||| ||||| Sbjct 656990 CCCGTAAGAGTCTTGACAAAGACCTGCAT 656962 >seq7 Length=546283 Score = 122 bits (134), Expect = 7e-23 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| ||| || || ||||||||| ||||||||||| || ||| |||| || Sbjct 171940 ACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCGTCCTCG 171881 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || |||||||| |||| ||||||||||| ||||| | |||||||||||| Sbjct 171880 AGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGG 171821 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | | ||||| | ||| ||||| | |||||||||||| Sbjct 171820 ATCTTGGCCTTGACATTCTCGATGGTGTCCGAAGACTCGACCTCGAGGGTAATCGTCTTA 171761 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 ||||| || ||||| || || | ||||||| Sbjct 171760 CCCGTAAGGGTCTTGACGAACACTTGCATG 171731 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395075122960336