Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20japonica_20[genbank_20GCA_5F001600795.1_202016-03-01] 16 sequences; 8,364,631 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq1 143 4e-29 >seq1 Length=1557178 Score = 143 bits (158), Expect = 4e-29 Identities = 387/588 (66%), Gaps = 8/588 (1%) Strand=Plus/Minus Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019 || || || ||| ||||||||||||||| | || || ||||| || || | ||| Sbjct 1053431 CACGCAAAGTCGGTGTGCAGACCCTCGTCACGCGAGATGAGCTCGTTCGAGAAGGCGAGA 1053372 Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAG 50079 || ||||| ||||| ||||| || |||||||| || || ||||| || || || |||||| Sbjct 1053371 CCCGGCATCAGGCCGCGCTTCTTCAGCCAAAAGATCGAGGCAAAGGAGCCCGAGAAGAAG 1053312 Query 50080 ATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAAC-TGGC---GCTGTCATG 50135 || || || || ||||||||||| || || | ||| | | ||| ||| || ||| | Sbjct 1053311 ATGCCCTCGACCGCGGCAAAGGCCACGAGGCGCTC-CGAGAACGAGGCGCGGCGGTCGTT 1053253 Query 50136 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 50195 ||||| | ||||| |||||||| | || || || || || || ||||| || Sbjct 1053252 GATCCAGCGCAGCGCCCACTCGGCCTTTTGCTTCACCACGGGGATGGTCTCGATGGCGTT 1053193 Query 50196 AAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACAT 50255 ||||| ||| || | || | || || ||||||| || || | Sbjct 1053192 GAAGAGGAAGTCGCGTTGGTCGGGCTCGCGGATGTAGGTGTCGATCAGGAGCGAGTAGGT 1053133 Query 50256 TTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAAT 50315 ||||| || ||||| || || ||||| || |||||||| || | ||||||| Sbjct 1053132 CTCCGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAGCGGGCCTCGGCGGC 1053073 Query 50316 CTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGC 50375 |||||| || | | || || || | || || ||||| || ||||| || || Sbjct 1053072 CTGCACCTCGGACGAGAAGCGCTCGAGGAGGTTCTCGTTCACGATACCGTCCGACGCGGC 1053013 Query 50376 AAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTA---GTTTATTCCA 50432 ||| ||||| | || || | | ||| || |||||| || | | || | ||| Sbjct 1053012 AAAGAACGCAAGGACGTGGCTCACAAAGTGACGCTCGTTGTCCGTCATGCGGTTGTCCCA 1052953 Query 50433 ATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTT 50492 || | | || || || | || | || || | ||||| || || ||||| ||||| Sbjct 1052952 GTCGTGCAGGTCCTTGGAGAGGTCAATCTCCTCGGCGGTCCAGAACGAGGCCTCGGCCTT 1052893 Query 50493 TTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAA 50540 || ||||| | |||||| || || || |||| ||||| | ||||| Sbjct 1052892 CTTGTACATCTGCCAGATCTCGTGGTAGCGGATGGGGAAGAGCACAAA 1052845 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718268656346240