Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20japonica_20[genbank_20GCA_5F001600795.1_202016-03-01] 16 sequences; 8,364,631 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq1 268 1e-66 seq3 187 4e-42 >seq1 Length=1557178 Score = 268 bits (296), Expect = 1e-66 Identities = 599/886 (68%), Gaps = 29/886 (3%) Strand=Plus/Plus Query 124995 CTGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTT 125054 || || |||||| | || || || || ||| | |||||||| ||||| ||||||| || Sbjct 1052851 CTCTTCCCCATCCGCTACCACGAGATCTGGCAGATGTACAAGAAGGCCGAGGCCTCGTTC 1052910 Query 125055 TGGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACT 125114 ||||| | ||| ||| | || || |||||||||||| |||| ||||| | || |||| Sbjct 1052911 TGGACCGCCGAGGAGATTGACCTCTCCAAGGACCTGCACGACTGGGACAACCGCATGACG 1052970 Query 125115 GAAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATC 125174 || | ||||| | ||| | ||| | | || |||||||||| || || || ||| Sbjct 1052971 GACAACGAGCGTCACTTTGTGAGCCACGTCCTTGCGTTCTTTGCCGCGTCGGACGGTATC 1053030 Query 125175 GTCAACGACAATCTGTTGACACGATTCTCTCAAGAGTTGACCATTCCA--GAGGTGTCGT 125232 || ||||| || || | || ||||| ||| || || || |||| | Sbjct 1053031 GTGAACGAGAACCTCCTCGAGCGCTTCTCGTCCGAGGTG--CAGGCCGCCGAGGCCCGCT 1053088 Query 125233 GCTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGA 125292 |||| ||||| ||||| |||||||| |||||| | |||||||| | ||||| |||| Sbjct 1053089 GCTTCTACGGTTTCCAGATCATGATGGAGAACATCCACTCGGAGACCTACTCGCTCCTGA 1053148 Query 125293 TTGACATGTACATTCGCGATCCGCAACGTAAAC-ACATGCTCTTTAACGCAATCGACACG 125351 | |||| ||||| ||||| || | || | | || | ||||| ||||| ||||| || Sbjct 1053149 TCGACACCTACATCCGCGAGCC-CGACCAACGCGACTTCCTCTTCAACGCCATCGAGACC 1053207 Query 125352 GTGCC-GTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTC 125410 | || || | | |||| ||| | |||| | | || |||||| | ||| | | Sbjct 1053208 ATCCCCGTGGTGAAGCAAAA-GGCCGAGTGGGCGCTGCGCTGGATCAACGACCGCCGCGC 1053266 Query 125411 TTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAG 125470 |||| | | || | || ||||| || ||||| || |||||||||||||| ||||| Sbjct 1053267 CTCGTTCTCGGAGCGCCTCGTGGCCTTTGCCGCGGTCGAGGGCATCTTCTTCTCGGGCTC 1053326 Query 125471 TTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAA 125530 ||||| | ||||||||||| ||||||||||| || ||||| || || | | || Sbjct 1053327 CTTTGCCTCGATCTTTTGGCTGAAGAAGCGCGGCCTGATGCCGGGTCTCGCCTTCTCGAA 1053386 Query 125531 CGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAA 125590 |||| | || || || |||||||| || ||| |||||||| || || ||| || | Sbjct 1053387 CGAGCTCATCTCGCGTGACGAGGGTCTGCACACCGACTTTGCGTGCCTGCTCTTTGGCCA 1053446 Query 125591 CTATCTGCGTCCCGAGTGCAGATC--CAGCGATGAA-AAGGTCATCAACATTGTAACCGA 125647 | || | || | ||| | || || |||| ||| ||||| ||||| Sbjct 1053447 C-CTC-AAGAAGCGCGCGCACCCCGACACCG-TGAACAAGATCATC---------ACCGA 1053494 Query 125648 TGCCGTGAGGATAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCAT 125707 ||||| ||| || ||||| ||| | || || | || ||||| | |||||||| Sbjct 1053495 GGCCGTCTCGATCGAGCAAGACTTTTTGACGGATGCGCTCCCGGTGTCGCTCATTGGCAT 1053554 Query 125708 GAACTGCAAGCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTT 125767 |||| | || |||||| ||||||| |||||||| || || || || || || Sbjct 1053555 GAACGCCCGTCTGATGTGCCAGTACATTGAGTTTGTTGCGGACCGCCTGCTTGTCG---C 1053611 Query 125768 GATTGGCCGC---AAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATC 125824 | | ||| | ||| |||||| | | ||| ||||| || || ||| | ||| || Sbjct 1053612 GCTCGGCAACTCGAAGCACTACAACTCGACGAACCCCTTCGACTTTATGGAGAACATCTC 1053671 Query 125825 ACTAGAGGGTAAGACCAACTTTTTCGAGAAGAAGGTCAGCGAGTAC 125870 || |||| ||| | |||||||||||| |||||| ||| ||| Sbjct 1053672 GCTCCAGGGCAAGTCGAACTTTTTCGAGCGCAAGGTCGCCGACTAC 1053717 >seq3 Length=1023756 Score = 187 bits (206), Expect = 4e-42 Identities = 351/511 (69%), Gaps = 4/511 (1%) Strand=Plus/Plus Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935 ||||| ||||| || || || || || | ||| | ||| | || || |||||| ||||| Sbjct 987056 CAGGGTGGCAACAAGCGCCCTGGTGCGTTTGCCATTTACCTTGAGCCGTGGCACTCGGAC 987115 Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995 || ||||| || || || | ||||| ||| || || |||| || || | ||| Sbjct 987116 GTCTTTGAGTTCATTGACCTCCGCAAGAACCACGGTAAGGAGGAGGTTCGTGCGCGCGAC 987175 Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTAC 97055 | || || || || ||||| || ||| ||||||||||||| ||| | | ||||| || Sbjct 987176 CTTTTCTACGCCCTATGGGTCCCTGATCTGTTCATGAAGCGTGTCGAGCAGGGTGGTGAC 987235 Query 97056 TGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTT 97115 |||| || |||||||| | | || || || || | || |||| ||||| ||||| Sbjct 987236 TGGACGCTGATGTGCCCTGCCGAGTGCCCTGGCCTCGCGGACTGCTACGGCGAGGAGTTC 987295 Query 97116 GAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCG-ATACGTGAGACGAGTCGATGCACG 97174 |||| ||| | |||||||| |||||||| ||| ||| ||| | || | Sbjct 987296 GAGGAGCTCTACGAGCGCTACGAGCGCGAGGGCCGCGGCCGTCGTACG-GTCAAGGCGC- 987353 Query 97175 AGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCT 97233 |||| || ||| | || || | ||| ||| | ||||| || || || | ||||||| Sbjct 987354 AGAAGCTCTGGTACGCGGTCCTTGAGGCGCAGATCGAGACGGGTACCCCCTTTATTCTCT 987413 Query 97234 ACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCA 97293 |||||||| | | || ||||| |||||||| || |||| |||||| || | Sbjct 987414 ACAAGGATGCTGCCAACCGCAAGAGCAACCAGAAGAACGTGGGTGTGATCAAGTCGTCGA 987473 Query 97294 ATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGTTCTGG 97353 | ||||||||||| ||| | |||||| ||| ||||| ||||| || || ||| |||| Sbjct 987474 ACCTGTGCACGGAGATTATCGAGTACAGCTCGCCGGATGAGACCGCCGTGTGCAACCTGG 987533 Query 97354 CATCGGTCAATCTGCCCAAGTTTGTAGAGGG 97384 | ||| | ||||| | ||| | ||||| Sbjct 987534 CCTCGATTGCCCTGCCTACCTTTATTGAGGG 987564 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741059051788160