Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20japonica_20[genbank_20GCA_5F001600795.1_202016-03-01] 16 sequences; 8,364,631 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq3 96.9 3e-15 seq2 91.5 1e-13 >seq3 Length=1023756 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || || | ||| |||| |||||||| |||||||| || |||||||||||| | Sbjct 657188 CCACCACGGAGGCGCAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTC 657129 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | | ||||| | || ||||| ||| | || || |||||||||||| ||| Sbjct 657128 AGCGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGAGGA 657069 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | |||||| ||||| || || || ||| || | | | ||||| || ||| Sbjct 657068 ATGCCCTCCTTGTCCTGGATCTTGGC--CTTGACGTTCTCAATCGTGTCCGAGGACTCGA 657011 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | |||||| || || || || || || |||||||| | |||||| Sbjct 657010 CCTCGAGGGTGATCGTCTTACCCGTAAGAGTCTTGACAAAGACCTGCAT 656962 Score = 86.0 bits (94), Expect = 5e-12 Identities = 154/223 (69%), Gaps = 4/223 (2%) Strand=Plus/Minus Query 16715 CGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTT 16774 || || | ||| |||| |||||||| |||||||| || |||||||||||| || || Sbjct 656121 CGGAGGCGCAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTG 656062 Query 16775 TTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCC 16834 | | ||||| | || ||||| ||| | || || |||||||||||| ||| | ||| Sbjct 656061 CGGCCATCCTCGAGCTGCTTGCCGGCAAAGATCAGACGCTGTTGGTCCGGAGGAATACCC 656002 Query 16835 TCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCA 16892 || ||||| || || || ||| || | | | ||||| | ||| || | Sbjct 656001 TCCTTGTCCTGGATCTTGGC--CTTGACGTTCTCAATCGTGTCCGAAGACTCGACCTCGA 655944 Query 16893 CGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||||| || |||||||| || || || ||||| | ||||| Sbjct 655943 GGGTGATTGTCTTTCCGGTAAGGGTCTTAACAAAGACTTGCAT 655901 >seq2 Length=1413755 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || |||||| |||||| || ||||||||||| | | ||| | ||||||||| || Sbjct 127546 TGGAGCGTGCTCTCCTTCTGAATGTTGTAGTCCGAGAGGGTACGGCCGTCCTCCAGCTGC 127487 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 ||||| || | || | ||||||||||||| ||| | |||||| ||||| || | | Sbjct 127486 TTGCCGGCGAAGATCAACCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGAACCTTC 127427 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 |||||| | | | ||||||| | ||| |||| ||||| || || || || Sbjct 127426 GACTTCACAATGTCGATCGTGTCGCTAGACTCGACCTCCAGAGTGATCGTCTTGCCAGTG 127367 Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935 || || |||| ||| || ||||| Sbjct 127366 AGAGTCTTGATAAAGATTTGCAT 127344 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405087921007840