Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20japonica_20[genbank_20GCA_5F001600795.1_202016-03-01] 16 sequences; 8,364,631 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq3 104 2e-17 seq2 102 7e-17 seq7 91.5 1e-13 >seq3 Length=1023756 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||| | |||||||| || | ||||| || || |||| || || || || | | Sbjct 655901 ATGCAAGTCTTTGTTAAGACCCTTACCGGAAAGACAATCACCCTCGAGGTCGAGTCTTCG 655960 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || | |||| || || || ||||||||||||||||| || || ||| Sbjct 655961 GACACGATTGAGAACGTCAAGGCCAAGATCCAGGACAAGGAGGGTATTCCTCCGGACCAA 656020 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || ||||||||||| ||| | |||||| |||||| | ||| |||||| Sbjct 656021 CAGCGTCTGATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACGCTGAGCGACTACAAC 656080 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || || || Sbjct 656081 ATCCAGAAGGAGTCGAC 656097 Score = 98.7 bits (108), Expect = 8e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| | ||||| || ||| | || ||||| ||| |||| || || || || || | Sbjct 656962 ATGCAGGTCTTTGTCAAGACTCTTACGGGTAAGACGATCACCCTCGAGGTCGAGTCCTCG 657021 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || | |||| || || || ||||||||||| ||||| || || ||| Sbjct 657022 GACACGATTGAGAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAA 657081 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || ||||||||||| ||| | |||||| |||||| | ||| |||||| Sbjct 657082 CAGCGCCTGATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACGCTGAGCGACTACAAC 657141 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || || || Sbjct 657142 ATCCAGAAGGAGTCGAC 657158 >seq2 Length=1413755 Score = 102 bits (112), Expect = 7e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||| | || ||| | || || || ||| ||||||| || || || | | | Sbjct 127344 ATGCAAATCTTTATCAAGACTCTCACTGGCAAGACGATCACTCTGGAGGTCGAGTCTAGC 127403 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | | || || |||| ||||||||||| ||||| || || ||| Sbjct 127404 GACACGATCGACATTGTGAAGTCGAAGGTTCAGGACAAGGAGGGCATTCCTCCGGACCAA 127463 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || | || || |||||||| ||| | ||||| ||| ||| |||| || |||||| Sbjct 127464 CAGCGGTTGATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGTACCCTCTCGGACTACAAC 127523 Query 22399 ATTCAAAAAGA 22409 ||||| || || Sbjct 127524 ATTCAGAAGGA 127534 >seq7 Length=546283 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||| | || || || || | || ||||| ||| | || || || || || | | Sbjct 171732 ATGCAAGTGTTCGTCAAGACCCTTACGGGTAAGACGATTACCCTCGAGGTCGAGTCTTCG 171791 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || |||| || || || ||||||||||| ||||| || || ||| Sbjct 171792 GACACCATCGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAA 171851 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || |||||||| ||| | ||||| |||||| | || || |||||| Sbjct 171852 CAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACTCTTTCGGACTACAAC 171911 Query 22399 ATTCAAAAAGAATCCACC 22416 || || || || || ||| Sbjct 171912 ATCCAGAAGGAGTCGACC 171929 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727918153040