Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20japonica_20[genbank_20GCA_5F001600795.1_202016-03-01] 16 sequences; 8,364,631 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq1 105 1e-17 seq5 93.3 9e-14 seq6 87.8 4e-12 >seq1 Length=1557178 Score = 105 bits (116), Expect = 1e-17 Identities = 117/156 (75%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 251559 GCGTTCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTT 251618 ||| ||||| || || |||||||||| || ||||| |||||| |||||||||||||| Sbjct 1053702 GCGCTCGAAAAAGTTCGACTTGCCCTGGAGCGAGATGTTCTCCATAAAGTCGAAGGGGTT 1053643 Query 251619 TGTGGCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTC 251678 || | ||||| ||||| | | ||| || || || | | |||||| || |||||||| Sbjct 1053642 CGTCGAGTTGTAGTGCTTCGAGTTGCCGAGCGCGACAAGCAGGCGGTCCGCAACAAACTC 1053583 Query 251679 CAGATACTGTCCCATCAGTTCAGAGTTCATGCCAAT 251714 | ||||| | |||||| | |||||||||||| Sbjct 1053582 AATGTACTGGCACATCAGACGGGCGTTCATGCCAAT 1053547 >seq5 Length=737206 Score = 93.3 bits (102), Expect = 9e-14 Identities = 152/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404 |||| || || || ||||| | ||||||||||| || |||| ||||||||||| ||| Sbjct 267723 GGTGTCGACCTCTGCAACTGTCAGTTCTCGCTCGCCTACGGTGCCAAGATTCTGCTGAAC 267782 Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464 | || ||| | |||||||| |||| || |||||| |||| || || || Sbjct 267783 ACGGCCACTCTCCGTCTTAAGCGTGGTCACCGCTACGGTCTCTGTGGTCGTAACGGTTCG 267842 Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524 |||||| || || ||||||||||| ||||| ||| | || || || || | | | Sbjct 267843 GGTAAGTCGACCCTCATGCGCGCCATCCAGAACGGCCAGGTCGAGGGCTTCCCCAGCCCC 267902 Query 279525 TCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGAC 279563 ||||| | || ||| || ||||||||| ||||| Sbjct 267903 GACGAGGTCCGCACCTGGTACGTCGAGCACGACCTCGAC 267941 Score = 89.7 bits (98), Expect = 1e-12 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 279705 CTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGTGCCGAT 279764 |||||||||||||||||||||||||| ||||| | || ||| | || | ||||| Sbjct 268077 CTGTCGGGTGGTTGGAAGATGAAGCTCGCCCTTGCGCGTGCCGTGCTGTTCAAGGCCGAC 268136 Query 279765 GTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGGCTAGTG 279824 | || ||||| |||||||| || |||||| ||||| || |||||| ||| | Sbjct 268137 ATTCTGCTGCTCGATGAGCCGACGAACCACTTGGACGTCATCAACGTGAAGTGGATCACC 268196 Query 279825 TCCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACGACTCTGGCTTC 279884 |||||| ||||| |||| | | || ||||||| || |||||||| ||| Sbjct 268197 GACTACCTGACCAGCCTGACCGAGACCACCTCGATCATTGTGTCGCACGACTCCAAGTTC 268256 Query 279885 CTAGATGCCGTGTG 279898 || | | |||||| Sbjct 268257 CTGAACGACGTGTG 268270 Score = 87.8 bits (96), Expect = 4e-12 Identities = 139/194 (72%), Gaps = 8/194 (4%) Strand=Plus/Plus Query 280168 TTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCG 280227 ||| ||| | || ||||| ||| |||||||||| ||||| |||| ||| || || Sbjct 268543 TTGCTGTGCTCGGCCCCAACGGTTCGGGTAAGTCGACCCTCGTCAAG---CTGGTTGTCG 268599 Query 280228 A-GACCCAG-GCC--ACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGCTTAC 280283 ||| | | ||| ||| || | | | |||||||| |||||| || || | |||| Sbjct 268600 GTGACACTGAGCCGAACTCGGGTGAGC-TCTGGAAGCACCCCAACCTGGTCATTGGTTAC 268658 Query 280284 GTCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATAC 280343 || || |||||||| ||||||||||| || | ||||| |||| ||||||| | ||| Sbjct 268659 GTGGCCCAGCACGCCTTCCACCACATTGACCAGCACCTCGACAAGACTCCTCTGGAGTAC 268718 Query 280344 ATTCAGTGGCGCTA 280357 || | |||||||| Sbjct 268719 ATGCTCTGGCGCTA 268732 >seq6 Length=701031 Score = 87.8 bits (96), Expect = 4e-12 Identities = 136/192 (71%), Gaps = 8/192 (4%) Strand=Plus/Plus Query 280170 GGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAG 280229 ||||||||||| || || |||||||||||| ||| || ||||| || || || || ||| Sbjct 325181 GGTGTCATTGGCCCGAACGGTGCGGGTAAGAGTACGCTGATCAAGGTGCTCACCGGTGAG 325240 Query 280230 A----CCCAGGCCACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGCTTACGT 280285 | ||| ||| ||||| || ||||| |||||| |||| |||| | | Sbjct 325241 ATTGTCCC---CCA-GGAGGGCAAGGTGGAAAAGCACCCCAACCTGCGTGTGGCGCTCAT 325296 Query 280286 CGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACAT 280345 || |||||||| |||||||| ||||| | |||||||| | ||| | ||| ||||| Sbjct 325297 GGCGCAGCACGCCTTCCACCATCTCGAGCAGCACCTGGAAAAGACCGCGTGCCAGTACAT 325356 Query 280346 TCAGTGGCGCTA 280357 |||||||| Sbjct 325357 CACCTGGCGCTA 325368 Score = 87.8 bits (96), Expect = 4e-12 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 280725 TCTGGAGGCCAGAAGGTCAAACTTGTCATCGGAGCAGCTCTGTGGCAACACCCTCACGTG 280784 || || ||||| |||||||| | || ||| || || |||||| | |||| || ||| Sbjct 325751 TCGGGCGGCCAAAAGGTCAAGGTCGTGCTCGCGGCCGCGCTGTGGAACAACCCCCAGGTG 325810 Query 280785 ATCGTTCTCGACGAGCCTACCAACTATCTGGACCGCGAGAGCCTGGGCGCTCT 280837 |||| ||||||||||| ||||||||||| ||||||||| || |||| ||| Sbjct 325811 CTCGTGCTCGACGAGCCGACCAACTATCTCGACCGCGAGGCGCTCGGCGGTCT 325863 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027836589293456