Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20japonica_20[genbank_20GCA_5F001600795.1_202016-03-01] 16 sequences; 8,364,631 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq7 161 2e-34 seq1 156 8e-33 seq5 93.3 8e-14 >seq7 Length=546283 Score = 161 bits (178), Expect = 2e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | |||| ||| || || ||||| || |||||||| || || || Sbjct 171958 CCACCACGCAGGCGAAGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAA 171899 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| |||||||| || || | |||||||| || ||| Sbjct 171898 AGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGAGGA 171839 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| || ||||| |||||||| |||||||||||| | || || || Sbjct 171838 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCGATGGTGTCCGAAGACTCGACC 171779 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||| || || || ||||| |||||||||||||| | ||||| Sbjct 171778 TCGAGGGTAATCGTCTTACCCGTAAGGGTCTTGACGAACACTTGCAT 171732 >seq1 Length=1557178 Score = 156 bits (172), Expect = 8e-33 Identities = 587/898 (65%), Gaps = 41/898 (5%) Strand=Plus/Minus Query 9938 GACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTCGAG 9997 ||| |||||||| ||| || | ||| ||||||||| ||||| |||||||||| ||| Sbjct 1053732 GACACCCGCCTTGGCGTAGTCGGCGACCTTGCGCTCGAAAAAGTTCGACTTGCCCTGGAG 1053673 Query 9998 GGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACCGAG 10057 || ||| |||||| ||||| ||||||||| | | | ||||| | || ||||| Sbjct 1053672 CGAGATGTTCTCCATAAAGTCGAAGGGGTTCGTCGAGTTGTAGTGCTTCGAGTTGCCGAG 1053613 Query 10058 TGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTTCAT 10117 || | | |||||| || || ||||| |||||||||| |||||| | |||||| Sbjct 1053612 CGCGACAAGCAGGCGGTCCGCAACAAACTCAATGTACTGGCACATCAGACGGGCGTTCAT 1053553 Query 10118 GCCAATCATGCGGCA-GGGGATGGCGTC--GCAAATGAAGTCCTTTTCGTTGGCGACCGC 10174 |||||| | ||| || |||| || || |||| ||||| | ||| | | ||| | Sbjct 1053552 GCCAATGA-GCGACACCGGGAGCGCATCCGTCAAA--AAGTCTTGCTCGATCGAGACGG- 1053497 Query 10175 TTCCTCGACGATGCTCTTTACCAC---GTCAAGGGACAGCTTG-TTCTCGAGCTTCGAAT 10230 ||||| |||| |||| ||| ||| ||| || | |||| ||| | | Sbjct 1053496 --CCTCGGTGATGATCTTGTTCACGGTGTC-GGGGTGCGCGCGCTTCTTGAGGTGGCCAA 1053440 Query 10231 ACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACA 10290 | || || |||| | ||| || |||||||| || ||||| |||||| || | Sbjct 1053439 AGAGCAGGCACGCAAAGTCGGTGTGCAGACCCTCGTCACGCGAGATGAGCTCGTTCGAGA 1053380 Query 10291 AACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCGG 10350 | | ||||| ||||| || || || || |||||| || || | | || || || | Sbjct 1053379 AGGCGAGACCCGGCATCAGGCCGCGCTTCTTCAGCCAAAAGATCGAGGCAAAGGAGCCCG 1053320 Query 10351 AGAACAGAAGA--CCCTCCACGCACACCCAGGCGACGAGGCGCTCTGCGAAGGA-GCG-G 10406 ||| |||||| ||||| || | |||| ||||||||||| | ||| || ||| | Sbjct 1053319 AGA--AGAAGATGCCCTCGACCGCGGCAAAGGCCACGAGGCGCTCCGAGAACGAGGCGCG 1053262 Query 10407 TCGCGCGAAAAGTATTTCG-AG-GCCCACGCTGCCTT---CTTTCCCACGGCAGGGATCG 10461 || || | | || || |||||| | ||||| ||| ||||| ||||| | Sbjct 1053261 GCGGTCGTTGA-TCCAGCGCAGCGCCCACTCGGCCTTTTGCTTCACCACG---GGGATGG 1053206 Query 10462 TCTCGATAGCCTCGAAGAGCTTGTTAC---GCTCGGTCTCGTCCTCAATAAGAGCATCAA 10518 ||||||| || | |||||| || | | |||| |||| | | || | || | Sbjct 1053205 TCTCGATGGCGTTGAAGAGGAAGTCGCGTTGGTCGGGCTCG--CGGATGTAG-GTGTCGA 1053149 Query 10519 GGAGCAGGGAGTATTGCTCGCTGTGGACGCTCTCATTGTACCCCTGGTAAGCGTAGAACA 10578 || || ||||| ||| ||||| | |||| | |||| || ||||||| Sbjct 1053148 TCAGGAGCGAGTAGGTCTCCGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGC 1053089 Query 10579 TACGTGCCGAGGGGTCCGTGACTTCCTCGGCAAAGTTGTTGTTCAGGTTCTCCATCACCA 10638 || ||| || | || || || | ||| | | |||||||| |||| | Sbjct 1053088 AGCGGGCCTCGGCGGCCTGCACCTCGGACGAGAAGCGCTCGAGGAGGTTCTCGTTCACGA 1053029 Query 10639 TGCCATCGCTGCCTGCAAAGAAGCCGAGGATGTGCTTGATGAAGTGGCGCTCATCATCGT 10698 | || || | |||||||| | |||| ||| | | ||||| ||||| | || Sbjct 1053028 TACCGTCCGACGCGGCAAAGAACGCAAGGACGTGGCTCACAAAGTGACGCTCGTTGTCCG 1052969 Query 10699 TCA---GTTTTTCACGCCAGTCTACCACATCCTGGTTGAGCTGGACCTCCTCCACGGTCC 10755 ||| | || || |||||| || |||| | ||| | | |||||| |||||| Sbjct 1052968 TCATGCGGTTGTC---CCAGTCGTGCAGGTCCTTGGAGAGGTCAATCTCCTCGGCGGTCC 1052912 Query 10756 AGAAAGTGGCAACGGCCTTCTTGTACATCTGGAAAATGTCGGGGTACCGGATGGGGAA 10813 |||| | ||| ||||||||||||||||||| | || ||| |||| ||||||||||| Sbjct 1052911 AGAACGAGGCCTCGGCCTTCTTGTACATCTGCCAGATCTCGTGGTAGCGGATGGGGAA 1052854 >seq5 Length=737206 Score = 93.3 bits (102), Expect = 8e-14 Identities = 180/265 (68%), Gaps = 3/265 (1%) Strand=Plus/Minus Query 225368 ACGAAAGCAGACAGGTTTCCGAGGTGCTTCGTGAGCTTGAGGTTCTTCTCGTAATGAACA 225427 ||||||||| ||||| ||| ||| | ||| ||||| | ||| || | | | Sbjct 268336 ACGAAAGCATCAAGGTTACCGGGGTAACGCTTGATCTTGAAGCGGTTCAGGT---GGAGA 268280 Query 225428 ATTGCCGAGCACACTGCGTCAAGGAAGCCAGAGTCGTGGGACACAATGATGGACGACACG 225487 || | | ||||| ||| ||||| |||||||| ||||||||||| || | Sbjct 268279 ATGTCGGTACACACGTCGTTCAGGAACTTGGAGTCGTGCGACACAATGATCGAGGTGGTC 268220 Query 225488 TTCGTCAGGCCCTTGAGGTGCGTGATGAGCCATGCCACGTTGCTGACGTCCATGTGGTTT 225547 | ||||||| | |||| | ||| ||| ||||||| ||||||||| |||||| Sbjct 268219 TCGGTCAGGCTGGTCAGGTAGTCGGTGATCCACTTCACGTTGATGACGTCCAAGTGGTTC 268160 Query 225548 GTAGGTTCGTCCAGAAGCAGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGC 225607 || || || || || ||||| ||||| || | | || | ||| |||| || | ||| Sbjct 268159 GTCGGCTCATCGAGCAGCAGAATGTCGGCCTTGAACAGCACGGCACGCGCAAGGGCGAGC 268100 Query 225608 TTCATTTTCCAGCCCCCGGACAGGG 225632 ||||| ||||| || || ||||||| Sbjct 268099 TTCATCTTCCAACCACCCGACAGGG 268075 Score = 84.2 bits (92), Expect = 4e-11 Identities = 97/127 (76%), Gaps = 4/127 (3%) Strand=Plus/Minus Query 224498 AGCGCGCCAAGCGACTCGCGGTCAAGGAAGTTCGTCGGCTCATCCAGGATGATAACGTGG 224557 ||||| |||||||||| ||||| | |||||| || ||||| ||||| | || | |||| Sbjct 269227 AGCGCAGCAAGCGACTCACGGTCCAAGAAGTTGGTGGGCTCGTCCAGCACAATGATGTGG 269168 Query 224558 GGGCACTGCCACAGG--GCTGCACCAACCACCAGCTTCACCTTCTGACCGCCAGAGAGGC 224615 || || ||| |||| || ||||| | || | ||| ||||||||||| || ||||| | Sbjct 269167 GG-CA-TGCGCCAGGTGGCGGCACCCAGGACGACCTTGACCTTCTGACCACCCGAGAGAC 269110 Query 224616 CGCGGAT 224622 |||| || Sbjct 269109 CGCGCAT 269103 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921622215675520