Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20japonica_20[genbank_20GCA_5F001600795.1_202016-03-01] 16 sequences; 8,364,631 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq3 95.1 1e-14 seq2 84.2 2e-11 seq7 82.4 6e-11 >seq3 Length=1023756 Score = 95.1 bits (104), Expect = 1e-14 Identities = 156/220 (71%), Gaps = 4/220 (2%) Strand=Plus/Minus Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGT-CG 33968 || ||||||||||| || ||||| ||||||||| |||||||| || || | || || Sbjct 656118 AGGCGCAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTC-GCTCAGCGTGCG 656060 Query 33969 CTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTC 34028 | || || | |||||||||||||| ||||| ||||| || ||| || | | ||| Sbjct 656059 GCCATCCTCGAGCTGCTTGCCGGCAAAGATCAGACGCTGTTGGTCCGGAGGAATACCCTC 656000 Query 34029 TTTGTCCATAATTTTTTGCTTAATGGAACTCACAC-TATCAGTAGATTCGCATTCGACCG 34087 |||||| || || ||| | | |||| | | || | ||| ||| |||| | Sbjct 655999 CTTGTCCTGGATCTTGGCCTTGA-CGTTCTCAATCGTGTCCGAAGACTCGACCTCGAGGG 655941 Query 34088 TTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127 | ||||| |||||||| || || || ||||||| |||||| Sbjct 655940 TGATTGTCTTTCCGGTAAGGGTCTTAACAAAGACTTGCAT 655901 Score = 82.4 bits (90), Expect = 6e-11 Identities = 96/127 (76%), Gaps = 2/127 (2%) Strand=Plus/Minus Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGT-CG 33968 || ||||||||||| || ||||| ||||||||| |||||||| || || | || || Sbjct 657179 AGGCGCAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTC-GCTCAGCGTGCG 657121 Query 33969 CTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTC 34028 | || || | |||||||||||||| ||||||||||| || ||| || | || ||| Sbjct 657120 GCCATCCTCGAGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGAGGAATGCCCTC 657061 Query 34029 TTTGTCC 34035 |||||| Sbjct 657060 CTTGTCC 657054 >seq2 Length=1413755 Score = 84.2 bits (92), Expect = 2e-11 Identities = 93/124 (75%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 33912 CCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTCGCTC 33971 ||| ||||| || || |||||||||||||||||||||||||| || | | || | Sbjct 127559 CCGAAGCACAAGGTGGAGCGTGCTCTCCTTCTGAATGTTGTAGTCCGAGAGGGTACGGCC 127500 Query 33972 GTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTCTTT 34031 ||| |||| ||||||||||| || |||| ||||| || ||| || | || ||| || Sbjct 127499 GTCCTCCAGCTGCTTGCCGGCGAAGATCAACCGCTGTTGGTCCGGAGGAATGCCCTCCTT 127440 Query 34032 GTCC 34035 |||| Sbjct 127439 GTCC 127436 >seq7 Length=546283 Score = 82.4 bits (90), Expect = 6e-11 Identities = 102/137 (74%), Gaps = 2/137 (1%) Strand=Plus/Minus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 ||| || | ||| || |||||||| ||||| || ||||||||| |||||||| || | Sbjct 171959 ACCACCACGCAGGCGAAGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGA 171900 Query 33960 CA-ATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCG 34018 | | || || |||| || | ||||||||||| || ||||||||||| || ||| | Sbjct 171899 AAGAGTGCGGC-CGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGAG 171841 Query 34019 GCACGCTCTCTTTGTCC 34035 | | || ||| |||||| Sbjct 171840 GAATGCCCTCCTTGTCC 171824 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397062322572832