Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20japonica_20[genbank_20GCA_5F001600795.1_202016-03-01] 16 sequences; 8,364,631 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq3 113 1e-19 seq2 105 2e-17 seq7 104 6e-17 seq5 91.5 3e-13 >seq3 Length=1023756 Score = 113 bits (124), Expect = 1e-19 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || || || | ||| || || ||||| || |||||| Sbjct 657188 CCACCACGGAGGCGCAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTC 657129 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 |||||||| || || || | || || || || |||||||| |||||||| || Sbjct 657128 AGCGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGAGGA 657069 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| || || || ||||| || || | || || || || Sbjct 657068 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCAATCGTGTCCGAGGACTCGACC 657009 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||||||||| || || ||||||||||| || | |||||| Sbjct 657008 TCGAGGGTGATCGTCTTACCCGTAAGAGTCTTGACAAAGACCTGCAT 656962 Score = 96.9 bits (106), Expect = 8e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || |||||| |||||||| || || || | || || || || ||| Sbjct 656091 TCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAG 656032 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 |||||||||||||| || || || || || |||||||| || || || ||||| Sbjct 656031 ATCAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTC 655972 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || || || || ||||| ||||| ||||| ||||| || ||||| || Sbjct 655971 TCAATCGTGTCCGAAGACTCGACCTCGAGGGTGATTGTCTTTCCGGTAAGGGTCTTAACA 655912 Query 288463 AATATCTGCAT 288473 || | ||||| Sbjct 655911 AAGACTTGCAT 655901 >seq2 Length=1413755 Score = 105 bits (116), Expect = 2e-17 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 288261 AAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTC 288320 ||| || || || | |||||| || || || || || ||||| | ||| || || ||||| Sbjct 127556 AAGCACAAGGTGGAGCGTGCTCTCCTTCTGAATGTTGTAGTCCGAGAGGGTACGGCCGTC 127497 Query 288321 TTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATC 288380 || | || || || |||||||||| |||||||| || || || || || || Sbjct 127496 CTCCAGCTGCTTGCCGGCGAAGATCAACCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTC 127437 Query 288381 CTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGT 288440 ||| | |||| ||||| | || || | ||||| || || || || || |||||||| Sbjct 127436 CTGAACCTTCGACTTCACAATGTCGATCGTGTCGCTAGACTCGACCTCCAGAGTGATCGT 127377 Query 288441 CTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||| || || |||||||||| || || ||||| Sbjct 127376 CTTGCCAGTGAGAGTCTTGATAAAGATTTGCAT 127344 >seq7 Length=546283 Score = 104 bits (114), Expect = 6e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||| || || |||| || || || ||||| || ||||| | Sbjct 171958 CCACCACGCAGGCGAAGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAA 171899 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || ||||||||||| |||||||| || Sbjct 171898 AGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGAGGA 171839 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| || || || || || || || | || || || || Sbjct 171838 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCGATGGTGTCCGAAGACTCGACC 171779 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| || |||||||| || || || ||||||||||| | ||||| Sbjct 171778 TCGAGGGTAATCGTCTTACCCGTAAGGGTCTTGACGAACACTTGCAT 171732 >seq5 Length=737206 Score = 91.5 bits (100), Expect = 3e-13 Identities = 234/349 (67%), Gaps = 12/349 (3%) Strand=Plus/Minus Query 325322 ATATATCGTGCACTCGCGTGATCCTTACCACCCTGCAATCTCGAACCGAACTGGCCCTCC 325381 ||||| || || || ||| ||||| || ||| | | | || ||| ||||| || | Sbjct 400625 ATATAACGGGCGCTGGCGGCGTCCTTGCCGCCCATCGAGCGCGTACCAAACTGACCGTTA 400566 Query 325382 GGCAACAACCAGTTGATGTTATTGCTTCCGACATAATCCTGTGCAAGGTTCACGATGGTC 325441 ||| |||| ||| | ||| ||||||||| | | || || || ||| ||||| ||| Sbjct 400565 GGCGACAAGAGGTTCACGTTGTTGCTTCCGCAAAAGTCTTGCGCGAGGCCGACGATCGTC 400506 Query 325442 CCTTGCAGAGATGCTTCGCCATGGTGATAGGCGCTATGCTCTGCAACGTAACCGCTGAAC 325501 | ||| ||| ||||| ||||| ||||| | ||||| | |||||||| || | Sbjct 400505 GCCGAGAGACTTGCCTCGCCGTGGTGGTAGGCAGTGTGCTCCGAGACGTAACCCTGGAGC 400446 Query 325502 TG-TGCAACCTTCACGTCGGTCGTCAAATTGCGCTTGAAAGCTG-AATATATCACTTTCC 325559 || |||| |||| | |||||| | | ||||||||| |||| | | | | |||||| | Sbjct 400445 TGCTGCA-CCTTGATCTCGGTCTTGAGCTTGCGCTTG-AAGCAGCCAAAGAGCACTTTGC 400388 Query 325560 GTTGAGAAGGTTTGAAACCATCAACGACCGACGGAATGCTTCGTTCCAGATCGTACCG-- 325617 | || || || | || || || |||||||| || || | | || ||| Sbjct 400387 GCTGGCCGGGCTTTAGTCCGTCGACCACCGACGGGATCGAGCG---GATGTTGT-CCGCC 400332 Query 325618 --CGAGAACAAAATAAGTTCCTTGTCGATGAAGTCGGGAACGGGAACCT 325664 |||||| | || |||||||||| ||| ||||| | | ||||| || Sbjct 400331 ATCGAGAAGAGGATCAGTTCCTTGTTGATAAAGTCCGAGATGGGAATCT 400283 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179654158170848