Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20japonica_20[genbank_20GCA_5F001600795.1_202016-03-01] 16 sequences; 8,364,631 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq5 95.1 3e-14 seq1 87.8 4e-12 >seq5 Length=737206 Score = 95.1 bits (104), Expect = 3e-14 Identities = 369/576 (64%), Gaps = 17/576 (3%) Strand=Plus/Minus Query 333783 TGGATAATAGAGGTGCAAACAGCGTCGAGGAACCCGGAGTCGTGTGACACAATCACGCAC 333842 |||| ||| ||| || || ||| |||||| ||||||||| |||||||| | | Sbjct 268285 TGGAGAATGTCGGTACACACGTCGTTCAGGAACTTGGAGTCGTGCGACACAATGATCGAG 268226 Query 333843 GAAACGTCCTTAAGGTTGATCAGGTATTCAATCAGCCACCTCACGTTAGACACAGAAAGA 333902 | || | ||| || ||||||| || | | |||| ||||||| || | Sbjct 268225 GTGGTCTCGGTCAGGCTGGTCAGGTAGTCGGTGATCCACTTCACGTTGATGACGTCCAAG 268166 Query 333903 TGGTTGGTCGGCTCGTCAAGAAGTAGTAGCTTTGCGTTCAGGAGCATTGCACGTGCAAGA 333962 ||||| |||||||| || || || || | | || || | |||| ||||| ||||| Sbjct 268165 TGGTTCGTCGGCTCATCGAGCAGCAGAATGTCGGCCTTGAACAGCACGGCACGCGCAAGG 268106 Query 333963 GCGAGTTTCATTTTCCACCCTCCTGAAAGAGTGTTAATTGGGGCAGATTGGCG---CTCA 334019 ||||| ||||| ||||| || || || || | | || ||| | | ||||| ||| Sbjct 268105 GCGAGCTTCATCTTCCAACCACCCGACAGGGCAGTGATGGGGCCGGCCTGGCGGGTCTCG 268046 Query 334020 ATATCAAAGCCAACCGATTCTAGAGTAGTTAC-GATCTTTTCACGAGACCAAATGTTTTC 334078 || ||||| | | | || ||| || | || | | || | ||| | Sbjct 268045 ---TCGAAGCCCATC--TCCTTGAGG-GTGGCAGAAGCCTCCTCGTG-------GTTGAC 267999 Query 334079 CTTTACTTGTTCATCATTGGCAATGAAGTCAATGATAGCCATGTTAGAATCGGACCCGTC 334138 || | | | || | |||||||||| | || | |||| | || || ||||| Sbjct 267998 GTTCAGGCGCTTGTCGGCGACAATGAAGTCGAGAATCGAGATGTCACCCTCCGAGCCGTC 267939 Query 334139 GAGATCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCCTTCAAGCTG 334198 ||| ||||| || ||||| || | | || | |||||| || || | ||| Sbjct 267938 GAGGTCGTGCTCGACGTACCAGGTGCGGACCTCGTCGGGGCTGGGGAAGCCCTCGACCTG 267879 Query 334199 ACCGTTCACAATAGCGCGCATCAGAGTTGATTTACCCGCCCCGTTTGGCCCACACAGACC 334258 |||||| || |||||||| || || || ||||||| ||||| | ||||| ||||| Sbjct 267878 GCCGTTCTGGATGGCGCGCATGAGGGTCGACTTACCCGAACCGTTACGACCACAGAGACC 267819 Query 334259 GTAGCGGTTTCCACGCTTCAGATTGAACCGCGTATTGTTCAGAAGAATTTTTCCACCATA 334318 |||||||| |||||||| ||| || | ||||||| ||||| || |||| || Sbjct 267818 GTAGCGGTGACCACGCTTAAGACGGAGAGTGGCCGTGTTCAGCAGAATCTTGGCACCGTA 267759 Query 334319 TGCCAGAGAAAATTCACAATCACACAGATCCTCACC 334354 || || || || | ||| | || || || |||| Sbjct 267758 GGCGAGCGAGAACTGACAGTTGCAGAGGTCGACACC 267723 Score = 93.3 bits (102), Expect = 9e-14 Identities = 238/355 (67%), Gaps = 12/355 (3%) Strand=Plus/Minus Query 297437 GTGAAAATATATCGTGCACTCGCGTGATCCTTACCACCCTGCAATCTCGAACCGAACTGG 297496 || || ||||| || || || ||| ||||| || ||| | | | || ||| ||||| Sbjct 400631 GTAAAGATATAACGGGCGCTGGCGGCGTCCTTGCCGCCCATCGAGCGCGTACCAAACTGA 400572 Query 297497 CCCTCCGGCAACAACCAGTTGATGTTATTGCTTCCGACATAATCCTGTGCAAGGTTCACG 297556 || | ||| |||| ||| | ||| ||||||||| | | || || || ||| ||| Sbjct 400571 CCGTTAGGCGACAAGAGGTTCACGTTGTTGCTTCCGCAAAAGTCTTGCGCGAGGCCGACG 400512 Query 297557 ATGGTCCCTTGCAGAGATGCTTCGCCATGGTGATAGGCGCTATGCTCTGCAACGTAACCG 297616 || ||| | ||| ||| ||||| ||||| ||||| | ||||| | |||||||| Sbjct 400511 ATCGTCGCCGAGAGACTTGCCTCGCCGTGGTGGTAGGCAGTGTGCTCCGAGACGTAACCC 400452 Query 297617 CTGAACTG-TGCAACCTTCACGTCGGTCGTCAAATTGCGCTTGAAAGCTG-AATATATCA 297674 || ||| |||| |||| | |||||| | | ||||||||| |||| | | | | || Sbjct 400451 TGGAGCTGCTGCA-CCTTGATCTCGGTCTTGAGCTTGCGCTTG-AAGCAGCCAAAGAGCA 400394 Query 297675 CTTTCCGTTGAGAAGGTTTGAAACCATCAACGACCGACGGAATGCTTCGTTCCAGATCGT 297734 |||| || || || || | || || || |||||||| || || | | || Sbjct 400393 CTTTGCGCTGGCCGGGCTTTAGTCCGTCGACCACCGACGGGATCGAGCG---GATGTTGT 400337 Query 297735 ACCG----CGAGAACAAAATAAGTTCCTTGTCGATGAAGTCGGGAACGGGAACCT 297785 ||| |||||| | || |||||||||| ||| ||||| | | ||||| || Sbjct 400336 -CCGCCATCGAGAAGAGGATCAGTTCCTTGTTGATAAAGTCCGAGATGGGAATCT 400283 >seq1 Length=1557178 Score = 87.8 bits (96), Expect = 4e-12 Identities = 113/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 243561 GCTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCAT 243620 ||| |||||||||||| | || ||| | |||||||| || || || || |||||| | Sbjct 1053543 GCTCATTGGCATGAACGCCCGTCTGATGTGCCAGTACATTGAGTTTGTTGCGGACCGCCT 1053602 Query 243621 TTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGA 243680 | ||||||| || | ||| |||||||| | ||||||||| | ||||||||| Sbjct 1053603 GCTTGTCGCGCTCGGCAACTCGAAGCACTACAACTCGACGAACCCCTTCGACTTTATGGA 1053662 Query 243681 GCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGA 243716 | ||| ||||| || || || | ||||| ||||| Sbjct 1053663 GAACATCTCGCTCCAGGGCAAGTCGAACTTTTTCGA 1053698 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102879773909600