Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20japonica_20[genbank_20GCA_5F001600795.1_202016-03-01] 16 sequences; 8,364,631 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq3 230 2e-55 >seq3 Length=1023756 Score = 230 bits (254), Expect = 2e-55 Identities = 602/910 (66%), Gaps = 10/910 (1%) Strand=Plus/Plus Query 93733 TTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGGGTTTCCGAGCGACCG 93792 ||||| || |||||| |||||||| || || | |||| ||| | ||||| || Sbjct 986636 TTCAAGACGCTGGAGCGTTCGTACCTGCTGCGCATCAACGGCAAGGTGGCGGAGCGCCCC 986695 Query 93793 CACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGACATGCCGAATGTTTTG 93852 || || |||| ||||| || || |||| || |||||| |||| | ||| | | Sbjct 986696 CAGCACATGCTCATGCGTGTTGCTGTCGGTATCCACGGCACCGACGTTGCGAGCGCGATC 986755 Query 93853 CGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCCACCCCGACCCTGTTCAAC 93912 | | | || ||| ||| ||| | ||| ||| | ||||| || |||||| Sbjct 986756 GAGACCTACAACATGATGTCGGAGAAGGCCTTTACGCACGCCTCGCCGACTCTCTTCAAC 986815 Query 93913 GCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACGAACAAGGCCGACTCC 93972 || || || ||| || |||||||| ||||| |||||| || | |||| |||||| Sbjct 986816 GCCGGTACACCGAACCCCCAGATGTCGTCGTGCTTCCTGGTGTGCATGAAGGACGACTCG 986875 Query 93973 ATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAAAATACG-CGGGGGG 94031 || || |||| ||||| |||||| || |||| || | || ||| | || || Sbjct 986876 ATTGAGGGCATTTACGACACGCTCAAGTCGTGCGCGATGAT-TAGCAAGACGGCCGGTGG 986934 Query 94032 AATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCGCGGTACCAATGG 94091 ||||| ||| ||||| | | |||| | ||||| ||||| ||| || || || Sbjct 986935 TATCGGTCTCAACATCCACTGCATCCGTGGTACCGGTTCGTACATTGCCGGCACGAACGG 986994 Query 94092 CACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCGCTACGTGGA 94151 |||||| || | || |||||||| || | ||||||| |||| ||||| || || Sbjct 986995 TGTTAGCAACGGTATCATTCCCATGCTCCGTGTGTACAACAACACGGCCCGCTATGTCGA 987054 Query 94152 CCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTGGCACGCGGA 94211 ||||||||| | | | ||| | || || | || || ||||| |||||| |||| Sbjct 987055 CCAGGGTGGCAACAAGCGCCCTGGTGCGTTTGCCATTTACCTTGAGCCGTGGCACTCGGA 987114 Query 94212 CGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGAGGGCCAGAGA 94271 ||| | ||||| ||||| || ||||||||||| || || || | || | || Sbjct 987115 CGTCTTTGAGTTCATTGACCTCCGCAAGAACCACGGTAAGGAGGAGGTTCGTGCGCGCGA 987174 Query 94272 CCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAGAAAAACTCCGC 94331 ||| |||||||| || ||||| || || || || ||||| || |||||| | | Sbjct 987175 CCTTTTCTACGCCCTATGGGTCCCTGATCTGTTCATGAAGCGTGTCGAGCAGGGTGGTGA 987234 Query 94332 CTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACGTTTGTGGATCGCGTTT 94391 ||||| || | || || || || || || || | ||| | || | || Sbjct 987235 CTGGACGCTGATGTGCCCTGCCGAGTGCCCTGGCCTCGCGGACTGCTACGGCGAGGAGTT 987294 Query 94392 TGAAGACTTGTATGCTCGTTACGAATCGC-AGGG-CAAGGCC--AGGAAGGTTATGGATG 94447 || || | || | || |||| | ||| |||| | |||| | | ||| | | | Sbjct 987295 CGAGGAGCTCTACGAGCGCTACG-AGCGCGAGGGCCGCGGCCGTCGTACGGTCA---AGG 987350 Query 94448 CTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGTACGCCCTACATCT 94507 | |||||| ||| | | || | || | ||| | ||||||||||| |||| || Sbjct 987351 CGCAGAAGCTCTGGTACGCGGTCCTTGAGGCGCAGATCGAGACGGGTACCCCCTTTATTC 987410 Query 94508 TGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGGGTGATCAAGAGCT 94567 | | |||||| ||| |||| |||| ||||||| || || | || ||||||||| | Sbjct 987411 TCTACAAGGATGCTGCCAACCGCAAGAGCAACCAGAAGAACGTGGGTGTGATCAAGTCGT 987470 Query 94568 CGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATTGCTGTGTGTAACC 94627 |||| |||||||| |||||| ||||||| | || ||||| |||| || ||||| |||| Sbjct 987471 CGAACCTGTGCACGGAGATTATCGAGTACAGCTCGCCGGATGAGACCGCCGTGTGCAACC 987530 Query 94628 TGGGCTCCAT 94637 ||| ||| || Sbjct 987531 TGGCCTCGAT 987540 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494723101055360