Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20japonica_20[genbank_20GCA_5F001600795.1_202016-03-01] 16 sequences; 8,364,631 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq1 181 1e-40 seq3 178 1e-39 seq7 100 3e-16 seq2 95.1 1e-14 >seq1 Length=1557178 Score = 181 bits (200), Expect = 1e-40 Identities = 339/494 (69%), Gaps = 33/494 (7%) Strand=Plus/Plus Query 52342 AAAAGGCTCAGTGGGCAATGAAGTGGATCGA-GAGCGACACCGCCACGCTGGCCGAGCGC 52400 ||||||| ||||||| || |||||| | || || | | ||| || | | |||||| Sbjct 1053224 AAAAGGCCGAGTGGGCGCTGCGCTGGATCAACGACCGCCGC-GCCTCGTTCTCGGAGCGC 1053282 Query 52401 ATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCGCCATCTTT 52460 | |||||||| ||| ||||||||| | || || || ||| ||||||| | |||||| Sbjct 1053283 CTCGTGGCCTTTGCCGCGGTCGAGGGCATCTTCTTCTCGGGCTCCTTTGCCTCGATCTTT 1053342 Query 52461 TACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGATATCGCGC 52520 | | || | | ||| | ||||| || || | ||| |||||| | || ||||| Sbjct 1053343 TGGCTGAAGAAGCGCGGCCTGATGCCGGGTCTCGCCTTCTCGAACGAGCTCATCTCGCGT 1053402 Query 52521 GACGAAGGACTGCACACGGACTTTGCGTGCCT---------CTACTACAAGACGCGCGTG 52571 ||||| || |||||||| |||||||||||||| | || ||||| ||||| | Sbjct 1053403 GACGAGGGTCTGCACACCGACTTTGCGTGCCTGCTCTTTGGCCACCTCAAGAAGCGCGCG 1053462 Query 52572 -ACCGAAAAATTGGATTCGGACACGATCCTGAGCATGTTCAAG---GAGGCGGTGGCTAT 52627 ||| | ||||| | ||| || | ||| ||||| || | || Sbjct 1053463 CACC-------------CCGACAC---CGTGAACAAGATCATCACCGAGGCCGTCTCGAT 1053506 Query 52628 CGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTC 52687 ||| | || ||||| |||| ||||| ||||| ||| | ||||||||||| | ||| Sbjct 1053507 CGAGCAAGACTTTTTGACGGATGCGCTCCCGGTGTCGCTCATTGGCATGAACGC-CCGTC 1053565 Query 52688 -CATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCAA 52746 |||||| ||||||| |||||||| ||||| || ||| | || |||||| | | | Sbjct 1053566 TGATGTGCCAGTACATTGAGTTTGTTGCGGACCGCCTGCTTGTCGCGCTCGGCAACTCGA 1053625 Query 52747 AGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGA 52806 || ||| |||| | || || || || |||||| | ||||| ||||| |||||||| Sbjct 1053626 AGCACTACAACTCGACGAACCCCTTCGACTTTATGGAGAACATCTCGCTCCAGGGCAAGT 1053685 Query 52807 CCAACTTTTTCGAG 52820 | |||||||||||| Sbjct 1053686 CGAACTTTTTCGAG 1053699 >seq3 Length=1023756 Score = 178 bits (196), Expect = 1e-39 Identities = 724/1118 (65%), Gaps = 35/1118 (3%) Strand=Plus/Minus Query 153028 GGTTGACCACTTGAAACTCGCCCGCCAACACTCGTCTCAAATATACATTGCTAGTGAAAG 153087 |||| ||||| || ||||| || || | ||| || | || || | ||| | ||| ||| Sbjct 988118 GGTTCACCACCTGGAACTCACCGGCAAGCACGCGGCGCATGTAAATGTTGTTCGTGTAAG 988059 Query 153088 GTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCGGCATGTACGCCA 153147 | || ||| | ||||| ||| || || ||| ||| | || |||||||| ||| | Sbjct 988058 GCTCGAAGCACTCGTTGAAGCCGAGGATCTGACTCGTCGACGCAGTCGGCATCGGCGCGA 987999 Query 153148 CCAACAAAGAATTCCGCAAGCCGTGCGCTCGAATGTCGTCCTTCAACGCCTGCCAATCCC 153207 | || || || |||| |||||| ||| | | |||| | | | ||| |||| Sbjct 987998 GGAGCAGCGAGTTGCGCAGACCGTGCTGGGCAATCTTGGCCTTGAGCTCAGCCCAGTCCC 987939 Query 153208 ACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGTAACACTCCTCGACTGGCGGGAC 153267 | || ||| || ||| |||||||| ||||||||| | | || | ||| || | Sbjct 987938 AGAGGTCCGTGGGGGTCTTGTTCCACAGGTCGTACTGCAGGATGCCCTGCGAGGCAGGGC 987879 Query 153268 TGCCGGCAAACGTACTGTAGCTGCCGT-CGCGTTGGGCCAGTTCGCAGCTAGC-CTCGAG 153325 |||| | | || ||| || | | | |||| | || ||||| | ||| ||| || Sbjct 987878 TGCCCTCGTAGGTCTCGTACACACCCTGCTCCTTGG-CAAGCTCGCA-CGAGCGCTCCAG 987821 Query 153326 CGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGAACGGCCGCTTCTTCGCTCTC 153385 || | | ||| || || ||| ||| || ||||| | | ||| || ||| || Sbjct 987820 GGCAGCGTGGTAGATCGTCTCGAAGATCTGCAGGTTGAGCATGCGCGCCTCGGAGCTGTC 987761 Query 153386 GTACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGACCCTGGATACCGACGCCGATGGG 153445 | || || || | || ||||||||| ||||| ||||| | ||||| || || || Sbjct 987760 AAAGGGATAGCCCATAATCATAAAGGCGTCCGCCAGGCCCTGAACACCGATACCAATCGG 987701 Query 153446 TCGATGCTTCTCGTTGCTGCGCCTCGCGCTCGCTATGGGATAGTGATTGCGATCGATAAT 153505 || || | |||| || | ||||||| | | ||| |||| ||| || ||||| Sbjct 987700 GCGGTGGCGCATGTTGGAACGGCGCGCGCTCTCGACGGGGTAGTAGTTGATGTCAATAAT 987641 Query 153506 TTTGTTGAGGTTGC-GCACCACCACTTTAGTTATCGCCTTAAGTTTCTCGAAATCATAGG 153564 ||| ||||| |||| ||||| || | || | | || | || | || Sbjct 987640 GCGGTTCAGGTTCTTGCAC-ACCACCTTGGCCGTCTCGTGCAGGCGGGCAAAGTTGTACT 987582 Query 153565 TCATTTCGTCGACGC-GTACGCATCGATT--------CACGGCAATAGACGCCAGATTAC 153615 || |||| ||| | || | | || || || |||||| || ||||| || | Sbjct 987581 TC--TTCGACGAGCCAGTGCCC-TCAATAAAGGTAGGCAGGGCAATCGAGGCCAGGTTGC 987525 Query 153616 AGACGGCCGTCTCTTC-GGCGTCGCTGTACTGCACGATCTCGGCGCAGAGGTTGCTGCAT 153674 | ||||| ||||| || |||| |||||||| | ||||| | ||| ||||| | Sbjct 987524 ACACGGCGGTCTCATCCGGCGA-GCTGTACTCGATAATCTCCGTGCACAGGTTCGACGAC 987466 Query 153675 TTTATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCGTCTTTGAAGAGCATG 153734 || || || |||| || | ||| ||||| ||||| ||| || || ||| |||| || Sbjct 987465 TTGATCACACCCACGTTCTTCTGGTTGCTCTTGCGGTTGGCAGCATCCTTGTAGAGAATA 987406 Query 153735 TACGGTCCGCCGGTCTCGACTTGCGTTTCGACGATAAACCTATGC-AGGTCCTGCGCTCG 153793 | || || ||||||| |||| || | || | || || | |||||| Sbjct 987405 AAGGGGGTACCCGTCTCGATCTGCGCCTCAAGGACCG-CGTACCAGAGCTTCTGCGCCTT 987347 Query 153794 CACCCGCTGCCGATAGCGGCCCTCGCTCTCGTATCGCTCGTACAGTCGCTCAAACTCGTC 153853 ||| | || ||||||||||| |||||| |||||||| || ||| ||||| || Sbjct 987346 GACCGTACGACGGCCGCGGCCCTCGCGCTCGTAGCGCTCGTAGAGCTCCTCGAACTCCTC 987287 Query 153854 GCCGTAGCAGTCGGCGAGGCCGGGACACTGATGCGGACACATCAGCGACCACATATCGTC 153913 |||||||||||| |||||||| || |||| || |||||||||| ||| | | | Sbjct 987286 GCCGTAGCAGTCCGCGAGGCCAGGGCACTCGGCAGGGCACATCAGCGTCCAGTCACCACC 987227 Query 153914 GGCGTTGACGCGTCGCATGAACAGATCCGGCACCCAGAGCGCGTACATGAGGTCGCGCGC 153973 | ||| || |||||||||||| || ||||| || ||||| | ||||||||||| Sbjct 987226 CTGCTCGACACGCTTCATGAACAGATCAGGGACCCATAGGGCGTAGAAAAGGTCGCGCGC 987167 Query 153974 CTTGCAATCCTCCGC--GCCCATGTTGCGTTTCAGA-TTGA--GCACGCTATAGATGTCG 154028 | | ||||| | || || | | || | || | | | || | | ||| ||| Sbjct 987166 ---ACGAACCTCCTCCTTACCGTGGTTC-TTGCGGAGGTCAATGAACTC-AAAGACGTCC 987112 Query 154029 GCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACCTTTACGC---TTTCCGCCCTGATCG 154085 | |||||| || |||| ||| | ||| | ||||| ||| || || ||||| ||| Sbjct 987111 GAGTGCCACGGCTCAAGGTAAATGGCAAACGCACCAGGGCGCTTGTTGCCACCCTGGTCG 987052 Query 154086 ACGTGGCGCACCATATTGTTGAAGACGCGCACCATGGG 154123 || | ||| || | |||||| | || || | |||||| Sbjct 987051 ACATAGCGGGCCGTGTTGTTGTACACACGGAGCATGGG 987014 Score = 120 bits (132), Expect = 3e-22 Identities = 143/194 (74%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||||||| || || |||||||| || || |||| | Sbjct 657155 GACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGGCCATCCTCGAGCTGCTTGCCGGCA 657096 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || ||||||||||||||||| || || || ||||| ||| || || | Sbjct 657095 AAGATCAGGCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACG 657036 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | ||||| | ||||| ||||||| || | ||| ||||| || ||||| || Sbjct 657035 TTCTCAATCGTGTCCGAGGACTCGACCTCGAGGGTGATCGTCTTACCCGTAAGAGTCTTG 656976 Query 138601 ACAAAAATCTGCAT 138614 ||||| | |||||| Sbjct 656975 ACAAAGACCTGCAT 656962 Score = 111 bits (122), Expect = 2e-19 Identities = 141/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||||||| || || |||||||| || || |||| | Sbjct 656094 GACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGGCCATCCTCGAGCTGCTTGCCGGCA 656035 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| |||||||||||||||||||| ||||| || ||||| ||| || || | Sbjct 656034 AAGATCAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGGATCTTGGCCTTGACG 655975 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | ||||| | ||||| ||||||| || | || || || || || || || Sbjct 655974 TTCTCAATCGTGTCCGAAGACTCGACCTCGAGGGTGATTGTCTTTCCGGTAAGGGTCTTA 655915 Query 138601 ACAAAAATCTGCAT 138614 ||||| | ||||| Sbjct 655914 ACAAAGACTTGCAT 655901 >seq7 Length=546283 Score = 100 bits (110), Expect = 3e-16 Identities = 139/195 (71%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| | ||| || ||||||||| || || |||| Sbjct 171925 GACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCG 171866 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || ||||||||||||||||| || || || ||||| ||| || || | Sbjct 171865 AAGATCAGGCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACA 171806 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||| | ||||| ||||||| || | ||| ||||| || || || || Sbjct 171805 TTCTCGATGGTGTCCGAAGACTCGACCTCGAGGGTAATCGTCTTACCCGTAAGGGTCTTG 171746 Query 138601 ACAAAAATCTGCATG 138615 || || | |||||| Sbjct 171745 ACGAACACTTGCATG 171731 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 |||||| |||| || | || | || | | | |||||||| || || || |||||||| Sbjct 270209 GCCGCCACGCAGGCGGAGGACGAGGTGCAGGGTCGACTCCTTCTGGATATTATAGTCGCT 270268 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | || ||| ||| ||||| || || || | | |||| || ||||||||||||||||| Sbjct 270269 GAGCGTCCGCCCGTCTTCGAGCTGCTTGCCCGCAAAGATCAGGCGCTGTTGGTCCGGAGG 270328 Query 138507 TATACCTTCTTTGTC 138521 || || || ||||| Sbjct 270329 AATMCCCTCCTTGTC 270343 >seq2 Length=1413755 Score = 95.1 bits (104), Expect = 1e-14 Identities = 140/196 (71%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| |||||||||||||| | ||||| |||||| || || || |||| | Sbjct 127535 CTCCTTCTGAATGTTGTAGTCCGAGAGGGTACGGCCGTCCTCCAGCTGCTTGCCGGCGAA 127476 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTG 138542 ||| | ||||||||||||||||| || || || ||||| ||| || | || | Sbjct 127475 GATCAACCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTC-CTGAACCTTCGACTTCACAA 127417 Query 138543 T-TCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTA 138601 | || | |||||| | ||||| ||||| | || | ||| || ||||| ||||| || | Sbjct 127416 TGTCGATCGTGTCGCTAGACTCGACCTCCAGAGTGATCGTCTTGCCAGTGAGAGTCTTGA 127357 Query 138602 CAAAAATCTGCATGGC 138617 ||| || |||||||| Sbjct 127356 TAAAGATTTGCATGGC 127341 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496262300747520