Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20japonica_20[genbank_20GCA_5F001600795.1_202016-03-01] 16 sequences; 8,364,631 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq3 203 5e-47 seq1 147 3e-30 >seq3 Length=1023756 Score = 203 bits (224), Expect = 5e-47 Identities = 513/771 (67%), Gaps = 12/771 (2%) Strand=Plus/Minus Query 203839 CTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCC 203898 |||| ||||||||||||||||||||| | ||||| | | | ||| |||||| |||| Sbjct 988465 CTTGCTCACCGTGAACTGAATGGCGTTGGCAGCAGGGCGAGTGCGCAGGTAGTACGTGCC 988406 Query 203899 GGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGG 203958 |||||| || ||||||| ||| ||||| | |||||| |||| || | || | | | || Sbjct 988405 GGTCTTGAGACCCTTCTTCCAGCCGTAGAAGTGCATCGAAGTAAGCTGGCCAAAGGTCGG 988346 Query 203959 GTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGG 204017 | | ||||||||| ||| |||||| || |||| || ||||| || || || | Sbjct 988345 CGCACTGAGGTGAATGTTGAGACTCTGGCTCTGACAGATG-AACGCGCCACGGTCCGCAG 988287 Query 204018 CCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACA-CGTCTCTGGTG 204076 |||| | |||||| ||| || ||||||||||||||||||| | | || || || | Sbjct 988286 CCATGTCGATAATCACCTTTTGGCTAATCTCCCACACCGTCTTGTAGAGCGCCT-TGATA 988228 Query 204077 TGTTGAGGCACATCTTCCCACGTCCT-GATCGAGCCGTTGTCGGCCATCAGTCTCATCCT 204135 | | || | | | |||| || |||||| || || ||| || | | | | | Sbjct 988227 CGGTCGGGGATA-CCGGGGACGTTCTGGATCGAACCACCGTGGGCAATGATGCGCTGCTT 988169 Query 204136 CGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGAT 204195 | || |||| ||| | |||| | || ||||| || | ||| |||||| | | Sbjct 988168 CATCGCCTCGTTCCAGAGGCCCTGCTCGACAAGCTCGCGGAGCAGCCAGGGGTTCACCAC 988109 Query 204196 CTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGC 204255 ||| || || |||| ||||| | || || | | |||||| ||| | || ||||| Sbjct 988108 CTGGAACTCACCGGCAAGCACGCGGCGCATGTAAATGTTGTTCGTGTAAGGCTCGAAGCA 988049 Query 204256 CTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGA 204315 ||||||| ||||| |||||| || || || ||||| || || |||||||| || Sbjct 988048 CTCGTTGAAGCCGAGGATCTGACTCGTCGACGCAGTCGGCATCGGCGCGAGGAGCAGCGA 987989 Query 204316 GTTGCGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGTCCAGTCGTGCATCGCACT 204375 |||||||| ||||| | | | || ||| || | |||||| | | | Sbjct 987988 GTTGCGCAGACCGTGCTGGGCAATCTTGGCCTTGAGCTCAGCCCAGTCCCAGAGGTCCGT 987929 Query 204376 GGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTGCCCTTGTA 204435 ||| || | ||||| |||| |||| | |||||| || | | |||||||||| ||| Sbjct 987928 GGGGGTCTTGTTCCACAGGTCGTACTGCAGGATGCCCTGCGAGGCAGGGCTGCCCTCGTA 987869 Query 204436 CGTCGGATA---AGGCTGATCCTCTTCTGCCAGCTTGCACGAGGCGGCCATGGCGTGATA 204492 ||| || | ||| ||| | || |||| ||||||| ||| ||| | Sbjct 987868 GGTCTCGTACACACCCTG---CTCCTTGGCAAGCTCGCACGAGCGCTCCAGGGCAGCGTG 987812 Query 204493 GTACATGGTCTCAAAGATCTGAACGTTTAATCTGGCGGCCTCCGTTCCGTCAAACGCCAG 204552 ||| || ||||| |||||||| | ||| | || ||||| | | |||||| | Sbjct 987811 GTAGATCGTCTCGAAGATCTGCAGGTTGAGCATGCGCGCCTCGGAGCTGTCAAAGGGATA 987752 Query 204553 ACCCAGCATGGCAAACACGTCCGCCAAGCCCTGCACTCCGATTCCCAACGG 204603 |||| || ||| ||||||||| |||||| || ||||| || | ||| Sbjct 987751 GCCCATAATCATAAAGGCGTCCGCCAGGCCCTGAACACCGATACCAATCGG 987701 >seq1 Length=1557178 Score = 147 bits (162), Expect = 3e-30 Identities = 347/520 (67%), Gaps = 17/520 (3%) Strand=Plus/Minus Query 159652 CTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTTCTT 159711 |||||||||||| | |||||||| | || || ||||| || |||| |||||| | Sbjct 1053699 CTCGAAAAAGTTCGACTTGCCCTGGAGCGAGATGTTCTCCATAAAGTCGAAGGGGTTCGT 1053640 Query 159712 CACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATTCGAT 159771 | || ||| |||||| ||||| || | |||| | ||| || ||||| || || Sbjct 1053639 CGAGTTGTAGTGCTTCGAGTTGCCGAGCGCGACAAGCAGGCGGTCCGCAACAAACTCAAT 1053580 Query 159772 GTAGCTACACATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCCGACAG 159831 ||| |||||| | ||| || || | ||| || |||||||| |||| || Sbjct 1053579 GTACTGGCACATCAGACGGGCGTTCATGCCAATGAGCGACACCGGGAGCGCATCCGTCAA 1053520 Query 159832 AAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGACACGTTCG---TACCC 159888 ||| || | ||| ||| ||| || ||||| | |||| || ||| | | | Sbjct 1053519 AAAGTCTTGCTCGATCGAGACGGCCTCGGTGATGATCTTGTTCACGGTGTCGGGGTGCGC 1053460 Query 159889 CGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTCCCTC 159948 |||| | | |||| | ||| || ||||||||||||||| |||||| ||||| Sbjct 1053459 GCGCTT---CTTGAGGTGGCC---AAAGAGCAGGCACGCAAAGTCGGTGTGCAGACCCTC 1053406 Query 159949 GTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTTTGAG 160008 ||| || ||||||| |||||| || | | ||| |||||||| | || ||| || || Sbjct 1053405 GTCACGCGAGATGAGCTCGTTCGAGAAGGCGAGACCCGGCATCAGGCCGCGCTTCTTCAG 1053346 Query 160009 CCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAACGCCAC 160068 |||||| || | ||||| | || || ||||| ||||| || || ||||| ||||| Sbjct 1053345 CCAAAAGATCGAGGCAAAGGAGCCCGAGAAGAAGATGCCCTCGACCGCGGCAAAGGCCAC 1053286 Query 160069 GAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATTCAGCCTT 160128 ||| | ||| || |||||| | ||| | | |||| | ||||| || |||| Sbjct 1053285 GAGGCGCTCCGAGAACGAGGCGCGGCGGTCGTTGATCCAGCGCAGCGCCCACTCGGCCT- 1053227 Query 160129 CTTTGCGATGCAC----GGCATGCGCTCGACGGCGTTAAA 160164 ||||| | ||| || ||| ||||| |||||| || Sbjct 1053226 -TTTGC--TTCACCACGGGGATGGTCTCGATGGCGTTGAA 1053190 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795155040968960